RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 IGFBP6P24592 240 aaPredicted RBP20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 MTHFRP42898 656 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 ZNF131P52739 623 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 SMTNP53814 917 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 NCKAP1LP55160 1127 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 GLRA4Q5JXX5 417 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 MPZL3Q6UWV2 235 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 CD300LGQ6UXG3 332 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 USP49Q70CQ1 688 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 RAD54LQ92698 747 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 ZBTB45Q96K62 511 aaPredicted RBP20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 REEP2Q9BRK0 252 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 SFXN1Q9H9B4 322 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 FNIP2Q9P278 1114 aa20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 MORC2Q9Y6X9 1032 aaPredicted RBP20.75■□□□□ 0.91
HMGB3P22-201ENST00000442010 SMIM28A0A1B0GU29 152 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 PAPLNO95428 1278 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 C1RP00736 705 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 ADH1AP07327 375 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 MARCKSP29966 332 aaPredicted RBP20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 MCM6Q14566 821 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 RTP2Q5QGT7 225 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 TMC5Q6UXY8 1006 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 GPR149Q86SP6 731 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 ZBTB33Q86T24 672 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 GPBP1Q86WP2 473 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 HASPINQ8TF76 798 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 EPSTI1Q96J88 318 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 RIPOR3Q96MK2 946 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 CCDC94Q9BW85 323 aaPredicted RBP20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 FOXD4L1Q9NU39 408 aa20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 LARSQ9P2J5 1176 aaKnown RBP20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 SRPRBQ9Y5M8 271 aaKnown RBP20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 SF3B1O75533 1304 aaKnown RBP eCLIP20.74■□□□□ 0.91
HMGB3P22-201ENST00000442010 TMEM189-UBE2V1I3L0A0 370 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 STX6O43752 255 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 TOM1L1O75674 476 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 OSTNP61366 133 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 SPECC1Q5M775 1068 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 ATAT1Q5SQI0 421 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 ZPBP2Q6X784 338 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 CMASQ8NFW8 434 aaPredicted RBP20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 RIN2Q8WYP3 895 aaPredicted RBP20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 EDAQ92838 391 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 SNX27Q96L92 541 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 ZMAT2Q96NC0 199 aaKnown RBP20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 FIZ1Q96SL8 496 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 MAN1C1Q9NR34 630 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 ANK1P16157 1881 aa20.73■□□□□ 0.91
HMGB3P22-201ENST00000442010 C2CD4DB7Z1M9 353 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 GLUD1P00367 558 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 DDIT3P35638 169 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 SOX4Q06945 474 aaPredicted RBP20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 STRN3Q13033 797 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 DHX8Q14562 1220 aaKnown RBP20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 UPP1Q16831 310 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 LILRA6Q6PI73 481 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 PRSS55Q6UWB4 352 aaPredicted RBP20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 HAUS6Q7Z4H7 955 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 LARP4BQ92615 738 aaKnown RBP20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 CLIC6Q96NY7 704 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 ACAP3Q96P50 834 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 USP28Q96RU2 1077 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 TCHPQ9BT92 498 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 RHOBTB2Q9BYZ6 727 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 HAPLN2Q9GZV7 340 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 TOPORSQ9NS56 1045 aaPredicted RBP20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 NR2E1Q9Y466 385 aa20.72■□□□□ 0.91
HMGB3P22-201ENST00000442010 KCNE1P15382 129 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 RPL17P18621 184 aaKnown RBP20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 SP100P23497 879 aaPredicted RBP20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 CLCNKBP51801 687 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 YARSP54577 528 aaKnown RBP20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 ZXDAP98168 799 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 MCL1Q07820 350 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 NOLC1Q14978 699 aaKnown RBP eCLIP20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 FAM171A1Q5VUB5 890 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 DCLRE1AQ6PJP8 1040 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 C15orf39Q6ZRI6 1047 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 C3orf58Q8NDZ4 430 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 LNX1Q8TBB1 728 aaPredicted RBP20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 HDAC7Q8WUI4 952 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 PIK3R5Q8WYR1 880 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 UROC1Q96N76 676 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 TTPALQ9BTX7 342 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 ZSCAN16Q9H4T2 348 aaPredicted RBP20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 PARVGQ9HBI0 331 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 GOLGA2P5Q9HBQ8 144 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 CNTN3Q9P232 1028 aa20.71■□□□□ 0.91
HMGB3P22-201ENST00000442010 H0YCG3 227 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 TGM5O43548 720 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 CREMQ03060 361 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 CEBPZQ03701 1054 aaKnown RBP20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 ELAVL2Q12926 359 aaKnown RBP20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 SLC39A14Q15043 492 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 SLC10A6Q3KNW5 377 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 PALB2Q86YC2 1186 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 CLSTN3Q9BQT9 956 aa20.7■□□□□ 0.9
HMGB3P22-201ENST00000442010 ANKFY1Q9P2R3 1169 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms