RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 NAMPTP43490 491 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 POLGP54098 1239 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 HADHBP55084 474 aaKnown RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 TNNC1P63316 161 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 ARID5AQ03989 594 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 FPGSQ05932 587 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 STRN3Q13033 797 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 DRAP1Q14919 205 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 UTP14CQ5TAP6 766 aaKnown RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 MEI1Q5TIA1 1274 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 KRT39Q6A163 491 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 PPP1R2P3Q6NXS1 205 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 CREG2Q8IUH2 290 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 RHOT2Q8IXI1 618 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 GPD1LQ8N335 351 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 NOA1Q8NC60 698 aaKnown RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 SLC7A3Q8WY07 619 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 CTNNBL1Q8WYA6 563 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 DHX38Q92620 1227 aaKnown RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 ZFP91Q96JP5 570 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 PBKQ96KB5 322 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 CAPZA3Q96KX2 299 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 MMS19Q96T76 1030 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 JPH2Q9BR39 696 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 CBWD1Q9BRT8 395 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 SYT11Q9BT88 431 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 TLR10Q9BXR5 811 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 POLR3FQ9H1D9 316 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 KCNH6Q9H252 994 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 FLRT1Q9NZU1 646 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 DIS3Q9Y2L1 958 aaKnown RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 COQ4Q9Y3A0 265 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 MAFBQ9Y5Q3 323 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-209ENST00000440653 ZNF318Q5VUA4 2279 aa9.86□□□□□ -0.83
HDAC6-209ENST00000440653 RFXAPO00287 272 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 PALMO75781 387 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 STBD1O95210 358 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 LDHAP00338 332 aaKnown RBP9.85□□□□□ -0.83
HDAC6-209ENST00000440653 RHOXF2BP0C7M4 288 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 CNGA1P29973 690 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 GCLCP48506 637 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-209ENST00000440653 SLC26A2P50443 739 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 GPC3P51654 580 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 MFAP3P55082 362 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 VSNL1P62760 191 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 APBA1Q02410 837 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 CYP24A1Q07973 514 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 TCEAL1Q15170 157 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 BEND6Q5SZJ8 279 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-209ENST00000440653 SLFN12LQ6IEE8 588 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 C11orf63Q6NUN7 778 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 C8orf74Q6P047 294 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 NFRKBQ6P4R8 1299 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 METTL7BQ6UX53 244 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 C16orf59Q7L2K0 433 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 KSR1Q8IVT5 923 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 SHCBP1Q8NEM2 672 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 LMO3Q8TAP4 145 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDAC6-209ENST00000440653 HERVK_113Q902F9 699 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 BICD1Q96G01 975 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 PKNOX2Q96KN3 472 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 MFSD14AQ96MC6 490 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 NT5C1BQ96P26 610 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 PNKPQ96T60 521 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 RHOXF2Q9BQY4 288 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 SELENOOQ9BVL4 669 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 NIFKQ9BYG3 293 aaKnown RBP9.85□□□□□ -0.83
HDAC6-209ENST00000440653 DHX33Q9H6R0 707 aaKnown RBP9.85□□□□□ -0.83
HDAC6-209ENST00000440653 MED4Q9NPJ6 270 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 GPRC5CQ9NQ84 441 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 XPNPEP1Q9NQW7 623 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 TFR2Q9UP52 801 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 YBX2Q9Y2T7 364 aaKnown RBP9.85□□□□□ -0.83
HDAC6-209ENST00000440653 DUSP10Q9Y6W6 482 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 TRANK1O15050 2925 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 RALGAPA2Q2PPJ7 1873 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 GBF1Q92538 1859 aa9.85□□□□□ -0.83
HDAC6-209ENST00000440653 ANKRD62A6NC57 917 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 CCDC188H7C350 402 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 DDX3XO00571 662 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 MAP2K7O14733 419 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 BUB1O43683 1085 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 EXTL3O43909 919 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 KIF4AO95239 1232 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 ADRB2P07550 413 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 RAG1P15918 1043 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 ADCYAP1R1P41586 468 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 LIG4P49917 911 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 PDE6CP51160 858 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 GCNT1Q02742 428 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 NNTQ13423 1086 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 RPS6KA1Q15418 735 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 PPP2R5EQ16537 467 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 SWSAP1Q6NVH7 229 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 MAEAQ7L5Y9 396 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 SLFN11Q7Z7L1 901 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms