RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PLCG1P19174 1290 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 SYT1P21579 422 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 TXLNAP40222 546 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 GRM5P41594 1212 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 FAM171A1Q5VUB5 890 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 MPZL3Q6UWV2 235 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 CCDC149Q6ZUS6 474 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 PALB2Q86YC2 1186 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 INTS4Q96HW7 963 aaKnown RBP21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 ZHX3Q9H4I2 956 aa21.76■■□□□ 1.07
SHROOM1-204ENST00000440118 MCF2P10911 925 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 CEBPZQ03701 1054 aaKnown RBP21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 NOLC1Q14978 699 aaKnown RBP eCLIP21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 KARSQ15046 597 aaKnown RBP21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 TAS1R3Q7RTX0 852 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 CEP120Q8N960 986 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 EDAQ92838 391 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 ACAP3Q96P50 834 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 TTPALQ9BTX7 342 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 CXCL16Q9H2A7 254 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 RXFP1Q9HBX9 757 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 CHST7Q9NS84 486 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 SLC38A7Q9NVC3 462 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 ODF2LQ9ULJ1 636 aa21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 PDCD11Q14690 1871 aaKnown RBP21.75■■□□□ 1.07
SHROOM1-204ENST00000440118 VWA8A3KMH1 1905 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 K7ENM7 598 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 B3GAT3O94766 335 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 HSP90AA1P07900 732 aaKnown RBP21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 MARCKSP29966 332 aaPredicted RBP21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 GRIN1Q05586 938 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 MYCT1Q8N699 235 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 TMEM161BQ8NDZ6 487 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 RAD54LQ92698 747 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 UROC1Q96N76 676 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 REEP2Q9BRK0 252 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 CCDC39Q9UFE4 941 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 CLIC4Q9Y696 253 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 TECTAO75443 2155 aa21.74■■□□□ 1.07
SHROOM1-204ENST00000440118 TRIOO75962 3097 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 C2CD4DB7Z1M9 353 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 TOM1L1O75674 476 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 EFEMP2O95967 443 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 SPATA31D3P0C874 917 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 MAPTP10636 758 aaKnown RBP21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 RPL17P18621 184 aaKnown RBP21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 ZXDAP98168 799 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 RESTQ13127 1097 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 MCM6Q14566 821 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 PSMD5Q16401 504 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 PTPN21Q16825 1174 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 RTP2Q5QGT7 225 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 PDXDC1Q6P996 788 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 PRSS55Q6UWB4 352 aaPredicted RBP21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 SPATA31D4Q6ZUB0 917 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 GPR149Q86SP6 731 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 LARP4BQ92615 738 aaKnown RBP21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 ACSF2Q96CM8 615 aaPredicted RBP21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 PPP1R10Q96QC0 940 aaKnown RBP21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 PIDD1Q9HB75 910 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 PARVGQ9HBI0 331 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 MYO10Q9HD67 2058 aa21.73■■□□□ 1.07
SHROOM1-204ENST00000440118 CLDN3O15551 220 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 LIG4P49917 911 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 CLCNKBP51801 687 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 C15orf39Q6ZRI6 1047 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 HSCBQ8IWL3 235 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 GPR65Q8IYL9 337 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 SNX27Q96L92 541 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 NTPCRQ9BSD7 190 aaKnown RBP21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 GOLGA2P5Q9HBQ8 144 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 PTPRHQ9HD43 1115 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 FNIP2Q9P278 1114 aa21.72■■□□□ 1.07
SHROOM1-204ENST00000440118 SMIM28A0A1B0GU29 152 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 CCDC195A0A1B0GUA6 201 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 HNRNPDLO14979 420 aaKnown RBP21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 TGM5O43548 720 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 TRAPPC3O43617 180 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 PROZP22891 400 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 NAB2Q15742 525 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 ARSHQ5FYA8 562 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 SPECC1Q5M775 1068 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 LIN9Q5TKA1 542 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 FAM173BQ6P4H8 233 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 DCLRE1AQ6PJP8 1040 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 ZPBP2Q6X784 338 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 TRIM67Q6ZTA4 783 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 OTOP3Q7RTS5 596 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 HAUS6Q7Z4H7 955 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 SMG7Q92540 1137 aaKnown RBP21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 MFSD14AQ96MC6 490 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 PLEKHA4Q9H4M7 779 aa21.71■■□□□ 1.07
SHROOM1-204ENST00000440118 TMEM221A6NGB7 291 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 M0R296 226 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 STX6O43752 255 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 BRD1O95696 1058 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 NCKAP1LP55160 1127 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 MTMR3Q13615 1198 aa21.7■■□□□ 1.06
SHROOM1-204ENST00000440118 HFE2Q6ZVN8 426 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms