RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 NT5DC1Q5TFE4 455 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 TWF2Q6IBS0 349 aaKnown RBP8.22□□□□□ -1.09
COPS3-203ENST00000439936 TAS1R3Q7RTX0 852 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 CDR2LQ86X02 465 aaPredicted RBP8.22□□□□□ -1.09
COPS3-203ENST00000439936 NPAS4Q8IUM7 802 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 ZNF689Q96CS4 500 aaPredicted RBP8.22□□□□□ -1.09
COPS3-203ENST00000439936 CCDC97Q96F63 343 aaPredicted RBP8.22□□□□□ -1.09
COPS3-203ENST00000439936 KIFC3Q9BVG8 833 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 CCDC113Q9H0I3 377 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 SEMA6BQ9H3T3 888 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 CUEDC2Q9H467 287 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 ZHX3Q9H4I2 956 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 ELAC1Q9H777 363 aaKnown RBP8.22□□□□□ -1.09
COPS3-203ENST00000439936 SLC28A3Q9HAS3 691 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 FAM105AQ9NUU6 356 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 PRMT7Q9NVM4 692 aaPredicted RBP8.22□□□□□ -1.09
COPS3-203ENST00000439936 TMEM161AQ9NX61 479 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 DACT1Q9NYF0 836 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 ARHGAP28Q9P2N2 729 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 KCNG1Q9UIX4 513 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 PIN4Q9Y237 131 aaKnown RBP8.22□□□□□ -1.09
COPS3-203ENST00000439936 HPSEQ9Y251 543 aa8.22□□□□□ -1.09
COPS3-203ENST00000439936 TRIP11Q15643 1979 aa8.21□□□□□ -1.09
COPS3-203ENST00000439936 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 EDN1P05305 212 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 CA3P07451 260 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 SLFN14P0C7P3 912 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 IDEP14735 1019 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 PFKFB1P16118 471 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 ATF7P17544 494 aaPredicted RBP8.21□□□□□ -1.1
COPS3-203ENST00000439936 NMT1P30419 496 aaKnown RBP8.21□□□□□ -1.1
COPS3-203ENST00000439936 AFMP43652 599 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 GATMP50440 423 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 NDUFA8P51970 172 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 NCKAP1LP55160 1127 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 FOXK2Q01167 660 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 AMPD3Q01432 767 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 TAP1Q03518 808 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 DMP1Q13316 513 aaPredicted RBP8.21□□□□□ -1.1
COPS3-203ENST00000439936 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.1
COPS3-203ENST00000439936 MAP7D1Q3KQU3 841 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 Q7L0L9 218 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 HAUS6Q7Z4H7 955 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 MRPL10Q7Z7H8 261 aaKnown RBP8.21□□□□□ -1.1
COPS3-203ENST00000439936 FSIP1Q8NA03 581 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 KDF1Q8NAX2 398 aaPredicted RBP8.21□□□□□ -1.1
COPS3-203ENST00000439936 TMEM161BQ8NDZ6 487 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 TIFAQ96CG3 184 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 PRIMPOLQ96LW4 560 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 FIZ1Q96SL8 496 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 YME1L1Q96TA2 773 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 C7orf25Q9BPX7 421 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 EIF2AQ9BY44 585 aaKnown RBP8.21□□□□□ -1.1
COPS3-203ENST00000439936 LRRC27Q9C0I9 530 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 TTYH1Q9H313 450 aaPredicted RBP8.21□□□□□ -1.1
COPS3-203ENST00000439936 GOLPH3LQ9H4A5 285 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 ZNF576Q9H609 170 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 PARVGQ9HBI0 331 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 RNF19AQ9NV58 838 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 PANK4Q9NVE7 773 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 PCDHB2Q9Y5E7 798 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 PCDHB11Q9Y5F2 797 aa8.21□□□□□ -1.1
COPS3-203ENST00000439936 LINC01553A4QN01 128 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 GOLGA6L4A6NEF3 574 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 MEIS3P2A8K0S8 358 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 ZNF202O95125 648 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 MAPTP10636 758 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 FGFR1P11362 822 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 CASP1P29466 404 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 SYKP43405 635 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 DHX9Q08211 1270 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 PRPF4BQ13523 1007 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 ZC2HC1CQ53FD0 456 aaPredicted RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 HERC4Q5GLZ8 1057 aaPredicted RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 EEF1DP3Q658K8 133 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 CNNM4Q6P4Q7 775 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 NOTUMQ6P988 496 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 SLC27A1Q6PCB7 646 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 AGMOQ6ZNB7 445 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 ZNF720Q7Z2F6 126 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 SPRED2Q7Z698 418 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 SFR1Q86XK3 245 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 GRAMD1CQ8IYS0 662 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 CEP57L1Q8IYX8 460 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 DEPDC4Q8N2C3 294 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 DEFB123Q8N688 67 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 GPR161Q8N6U8 529 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 RNF169Q8NCN4 708 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 SMG8Q8ND04 991 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 MRPS27Q92552 414 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 LPPQ93052 612 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 PAGE5Q96GU1 130 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 ZBTB45Q96K62 511 aaPredicted RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 CASD1Q96PB1 797 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 ACO2Q99798 780 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 ARID3AQ99856 593 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms