RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 COPS5Q92905 334 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 NUDT11Q96G61 164 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 FAM193BQ96PV7 902 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 LMF1Q96S06 567 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 SLX1AQ9BQ83 275 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 TTLL2Q9BWV7 592 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 DHX36Q9H2U1 1008 aaKnown RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 VPS45Q9NRW7 570 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 IFT80Q9P2H3 777 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 EPS15L1Q9UBC2 864 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 CDC23Q9UJX2 597 aa4.15□□□□□ -1.75
HMGB1P12-201ENST00000438594 TRAV20A0A0B4J274 112 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 A0A1W2PQU0 124 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 AP1G1O43747 822 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 AHCYL1O43865 530 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 OPA1O60313 960 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGA12O60330 932 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 DNTTP04053 509 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 MUTP22033 750 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 GRK2P25098 689 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 MCM7P33993 719 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PPM1AP35813 382 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 TNNT2P45379 298 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 HSD17B7P56937 341 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 UBASH3AP57075 661 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 KRT85P78386 507 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 IFT88Q13099 833 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZNF267Q14586 743 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 LSM12Q3MHD2 195 aaKnown RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 TTC31Q49AM3 519 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 RRP12Q5JTH9 1297 aaKnown RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 MIIPQ5JXC2 388 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 DGKKQ5KSL6 1271 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 IFIT1BQ5T764 474 aaKnown RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 CCDC30Q5VVM6 783 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 STEAP3Q658P3 488 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 IGFL4Q6B9Z1 124 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 IQSEC1Q6DN90 963 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 GTF2IRD2BQ6EKJ0 949 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 TCTN3Q6NUS6 607 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 NEK10Q6ZWH5 1172 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PDZD4Q76G19 769 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 CATSPER4Q7RTX7 472 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 GTF2IRD2Q86UP8 949 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 TEX11Q8IYF3 940 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 OR2C3Q8N628 320 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 FAM156AQ8NDB6 213 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 OR2W6PQ8NHA6 318 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 NEU4Q8WWR8 484 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 DIO2Q92813 273 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 EXTL1Q92935 676 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 USP13Q92995 863 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 FAXDC2Q96IV6 333 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 RIPOR3Q96MK2 946 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 ASB2Q96Q27 587 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 LGR4Q9BXB1 951 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 ARFGAP3Q9NP61 516 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 GPRC5BQ9NZH0 403 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 RBPJLQ9UBG7 517 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZFR2Q9UPR6 939 aaKnown RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 TMEM98Q9Y2Y6 226 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 EMC9Q9Y3B6 208 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGB6Q9Y5F9 930 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGA9Q9Y5G4 932 aaKnown RBP4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGA8Q9Y5G5 932 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGA7Q9Y5G6 932 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGA6Q9Y5G7 932 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGA3Q9Y5H0 932 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHGA2Q9Y5H1 932 aa4.14□□□□□ -1.75
HMGB1P12-201ENST00000438594 TCRBV5S2A0A599 114 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 IPO5O00410 1097 aaKnown RBP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 P4HA2O15460 535 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 DKC1O60832 514 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 BAG2O95816 211 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 TBX18O95935 607 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 LRG1P02750 347 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ASLP04424 464 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 C6orf222P0C671 652 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 JMJD7P0C870 316 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 AKR1B1P15121 316 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 VCAM1P19320 739 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ELF1P32519 619 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 HPDP32754 393 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ADCYAP1R1P41586 468 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ECI1P42126 302 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 STAT1P42224 750 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 GABREP78334 506 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 DGCR2P98153 550 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 PTH1RQ03431 593 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 KLF1Q13351 362 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 SEMA5AQ13591 1074 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 TRIM29Q14134 588 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 LLGL1Q15334 1064 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZNF568Q3ZCX4 644 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 CC2D1BQ5T0F9 858 aaKnown RBP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ARMC4Q5T2S8 1044 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 FAM205BPQ63HN1 556 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 TAX1BP1Q86VP1 789 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 NLRP10Q86W26 655 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 PTRH1Q86Y79 214 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms