RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 CMTR1Q8N1G2 835 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 FLCNQ8NFG4 579 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 NCOA7Q8NI08 942 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 TMEM40Q8WWA1 233 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 MXRA8Q9BRK3 442 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 DBR1Q9UK59 544 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 IRAK3Q9Y616 596 aa9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 MYH9P35579 1960 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-208ENST00000436412 CFAP47Q6ZTR5 3102 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 CYP21A2P08686 494 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 ZSCAN20P17040 1043 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 ALDH7A1P49419 539 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 RAC1P63000 192 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 TDGQ13569 410 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 AAMPQ13685 434 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 PUM1Q14671 1186 aaKnown RBP eCLIP9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 CEP55Q53EZ4 464 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 RARS2Q5T160 578 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 CWF19L1Q69YN2 538 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 FAM228AQ86W67 206 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 PPFIBP1Q86W92 1011 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 ZNF654Q8IZM8 581 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 SLC39A11Q8N1S5 342 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 TMTC2Q8N394 836 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 DTWD2Q8NBA8 298 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 IGDCC4Q8TDY8 1250 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 MTA3Q9BTC8 594 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 MRPL9Q9BYD2 267 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 SMOC2Q9H3U7 446 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 CDH22Q9UJ99 828 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 PCDHA6Q9UN73 950 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 PCDHA8Q9Y5H6 950 aa9.53□□□□□ -0.88
NIF3L1-208ENST00000436412 DYRK3O43781 588 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 MMP20O60882 483 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 GPR32O75388 356 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 CXCL14O95715 111 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 FOSP01100 380 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 NPR3P17342 541 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 POLGP54098 1239 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 UBE2SQ16763 222 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 KIZQ2M2Z5 673 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 ABHD15Q6UXT9 468 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 CHD1LQ86WJ1 897 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 SMC5Q8IY18 1101 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 Q8N3U1 123 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 RMDN1Q96DB5 314 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 TMEM169Q96HH4 297 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 OSMRQ99650 979 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 RNF19AQ9NV58 838 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 IGSF9Q9P2J2 1179 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 STK39Q9UEW8 545 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 FBXL21Q9UKT6 434 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 DUSP12Q9UNI6 340 aa9.52□□□□□ -0.89
NIF3L1-208ENST00000436412 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 F5P12259 2224 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 BAHCC1Q9P281 2608 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 A0A0U1RQF3 1178 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 E7EWF7 191 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 MEIS1O00470 390 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 MAGEB2O15479 319 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 PI15O43692 258 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 C22orf31O95567 290 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 WEE2P0C1S8 567 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 CALM1P0DP23 149 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 CALM2P0DP24 149 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 CALM3P0DP25 149 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 PBX3P40426 434 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 ITGB3BPQ13352 177 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 NONOQ15233 471 aaKnown RBP eCLIP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 DIEXFQ68CQ4 756 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 MIS18BP1Q6P0N0 1132 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 ELMSAN1Q6PJG2 1045 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 ZC3H14Q6PJT7 736 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 CCDC149Q6ZUS6 474 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 NIPA1Q7RTP0 329 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 GPR149Q86SP6 731 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 CABP7Q86V35 215 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 ECHDC2Q86YB7 292 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 VPS52Q8N1B4 723 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 SRBD1Q8N5C6 995 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 C12orf76Q8N812 135 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 CYP2W1Q8TAV3 490 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 RUFY2Q8WXA3 655 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 BORCS6Q96GS4 357 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 MAP7D2Q96T17 732 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 MKNK1Q9BUB5 465 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 SMG9Q9H0W8 520 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 ZBP1Q9H171 429 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 RWDD1Q9H446 243 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 KCNK12Q9HB15 430 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 LY9Q9HBG7 655 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 AGO4Q9HCK5 861 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 ZNF302Q9NR11 478 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 WNT16Q9UBV4 365 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 CEP131Q9UPN4 1083 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 FANCMQ8IYD8 2048 aa9.51□□□□□ -0.89
NIF3L1-208ENST00000436412 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms