RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 PPIGQ13427 754 aaKnown RBP eCLIP12.9□□□□□ -0.346e-6■■■□□ 18.4
UBE3B-203ENST00000434735 IQSEC1Q6DN90 963 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 TAF2Q6P1X5 1199 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 UNC13DQ70J99 1090 aa12.9□□□□□ -0.34
UBE3B-203ENST00000434735 EIF3CQ99613 913 aaKnown RBP12.9□□□□□ -0.34
UBE3B-203ENST00000434735 PPFIA2O75334 1257 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 TRIM49P0CI25 452 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 TRIM49CP0CI26 452 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 TPI1P60174 286 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 SF3A3Q12874 501 aaKnown RBP eCLIP12.9□□□□□ -0.35
UBE3B-203ENST00000434735 SPOPLQ6IQ16 392 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 CTU1Q7Z7A3 348 aaKnown RBP12.9□□□□□ -0.35
UBE3B-203ENST00000434735 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 CFAP36Q96G28 342 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 PGLYRP2Q96PD5 576 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 EPAS1Q99814 870 aa12.9□□□□□ -0.35
UBE3B-203ENST00000434735 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 CAND2O75155 1236 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 INHAP05111 366 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 IL1R1P14778 569 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 BBOF1Q8ND07 529 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 CABS1Q96KC9 395 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 A0A087WZ62 844 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 ENDOD1O94919 500 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 INPP1P49441 399 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 MAPRE1Q15691 268 aaKnown RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 CCDC144BQ3MJ40 725 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 MMEL1Q495T6 779 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 FDXACB1Q9BRP7 624 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 TARS2Q9BW92 718 aaKnown RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 FRMPD1Q5SYB0 1578 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 CCNE1P24864 410 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 TTC31Q49AM3 519 aaPredicted RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 OR6P1Q8NGX9 317 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 MGARPQ8TDB4 240 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 MRPS23Q9Y3D9 190 aaKnown RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 INHBAP08476 426 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 SLC11A2P49281 568 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 CCDC13Q8IYE1 715 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 DHX38Q92620 1227 aaKnown RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 VPS39Q96JC1 886 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 XPO4Q9C0E2 1151 aaKnown RBP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 SMPD4Q9NXE4 827 aa12.89□□□□□ -0.35
UBE3B-203ENST00000434735 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBE3B-203ENST00000434735 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 ETFBP38117 255 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 PSMC6P62333 389 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 ASPHQ12797 758 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 COG4Q9H9E3 785 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 SNX2O60749 519 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 ALDH1A2O94788 518 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 PRAMEP78395 509 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 METTL7BQ6UX53 244 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 PCGF5Q86SE9 256 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 PAGE5Q96GU1 130 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 KIFC3Q9BVG8 833 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 IMPACTQ9P2X3 320 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 BCL9O00512 1426 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 CALB1P05937 261 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 PPP4CP60510 307 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 CFAP61Q8NHU2 1237 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 USP33Q8TEY7 942 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 TRPV2Q9Y5S1 764 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 GOLGA8QA0A0J9YX86 632 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 GOLGA8OA6NCC3 632 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 GOLGA8NF8WBI6 632 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 LMNB2Q03252 620 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 PLD1Q13393 1074 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 TMCO5AQ8N6Q1 288 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 SLC7A14Q8TBB6 771 aa12.88□□□□□ -0.35
UBE3B-203ENST00000434735 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-203ENST00000434735 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 H3BRJ5 948 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 CYB561D2O14569 222 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 IL18RAPO95256 599 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 TTC4O95801 387 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ITGB3P05106 788 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 PAPOLAP51003 745 aaKnown RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 STX1BP61266 288 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 KIAA1324Q6UXG2 1013 aaKnown RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms