RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 TRIM43BA6NCK2 446 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 P4HA2O15460 535 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 MEFVO15553 781 aaPredicted RBP28.68■■■□□ 2.18
TMEM248-205ENST00000433271 N4BP1O75113 896 aaKnown RBP28.68■■■□□ 2.18
TMEM248-205ENST00000433271 ZNF623O75123 536 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 TIMP1P01033 207 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 GCLMP48507 274 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 YARSP54577 528 aaKnown RBP28.68■■■□□ 2.18
TMEM248-205ENST00000433271 PTPN21Q16825 1174 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 CBWD6Q4V339 395 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 CBWD3Q5JTY5 395 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 CBWD5Q5RIA9 395 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 WDR49Q8IV35 697 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 CD302Q8IX05 232 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 DBF4BQ8NFT6 615 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 APBB2Q92870 758 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 TRIM43Q96BQ3 446 aaPredicted RBP28.68■■■□□ 2.18
TMEM248-205ENST00000433271 CGRRF1Q99675 332 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 MMRN2Q9H8L6 949 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 RGS18Q9NS28 235 aa28.68■■■□□ 2.18
TMEM248-205ENST00000433271 TOPORSQ9NS56 1045 aaPredicted RBP28.68■■■□□ 2.18
TMEM248-205ENST00000433271 LACTBL1A8MY62 500 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 SKIP12755 728 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 RFC2P35250 354 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 AP3M2P53677 418 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 MRPL10Q7Z7H8 261 aaKnown RBP28.67■■■□□ 2.18
TMEM248-205ENST00000433271 HACE1Q8IYU2 909 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 ZNF516Q92618 1163 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 PDLIM2Q96JY6 352 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 TMEM8AQ9HCN3 771 aa28.67■■■□□ 2.18
TMEM248-205ENST00000433271 PRDM5Q9NQX1 630 aaPredicted RBP28.67■■■□□ 2.18
TMEM248-205ENST00000433271 RECQL4O94761 1208 aa28.66■■■□□ 2.18
TMEM248-205ENST00000433271 SYCP1Q15431 976 aa28.66■■■□□ 2.18
TMEM248-205ENST00000433271 SPECC1LQ69YQ0 1117 aa28.66■■■□□ 2.18
TMEM248-205ENST00000433271 RTN4RL1Q86UN2 441 aaPredicted RBP28.66■■■□□ 2.18
TMEM248-205ENST00000433271 DRC7Q8IY82 874 aa28.66■■■□□ 2.18
TMEM248-205ENST00000433271 ABHD8Q96I13 439 aa28.66■■■□□ 2.18
TMEM248-205ENST00000433271 TMEM117Q9H0C3 514 aa28.66■■■□□ 2.18
TMEM248-205ENST00000433271 RNF39Q9H2S5 420 aa28.66■■■□□ 2.18
TMEM248-205ENST00000433271 MKI67P46013 3256 aaKnown RBP28.66■■■□□ 2.18
TMEM248-205ENST00000433271 AKAP5P24588 427 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 MXI1P50539 228 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 MYL7Q01449 175 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 CETN1Q12798 172 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 KRT39Q6A163 491 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 ALKAL1Q6UXT8 129 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 SV2AQ7L0J3 742 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 SNX27Q96L92 541 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 APOL6Q9BWW8 343 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 TSPYL2Q9H2G4 693 aaPredicted RBP28.65■■■□□ 2.18
TMEM248-205ENST00000433271 SIK3Q9Y2K2 1263 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 PTPRJQ12913 1337 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 GBP6Q6ZN66 633 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 SLC24A5Q71RS6 500 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 CRACR2AQ9BSW2 395 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 PARP2Q9UGN5 583 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 ITIH6Q6UXX5 1313 aa28.65■■■□□ 2.18
TMEM248-205ENST00000433271 RAG1P15918 1043 aa28.64■■■□□ 2.18
TMEM248-205ENST00000433271 CCDC173Q0VFZ6 552 aa28.64■■■□□ 2.18
TMEM248-205ENST00000433271 KCNMA1Q12791 1236 aa28.64■■■□□ 2.18
TMEM248-205ENST00000433271 EXOC3L4Q17RC7 722 aa28.64■■■□□ 2.18
TMEM248-205ENST00000433271 DUOXA2Q1HG44 320 aa28.64■■■□□ 2.18
TMEM248-205ENST00000433271 LMBRD2Q68DH5 695 aaPredicted RBP28.64■■■□□ 2.18
TMEM248-205ENST00000433271 C15orf39Q6ZRI6 1047 aa28.64■■■□□ 2.18
TMEM248-205ENST00000433271 C1orf112Q9NSG2 853 aa28.64■■■□□ 2.18
TMEM248-205ENST00000433271 CITO14578 2027 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 C9IYK1 514 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 C4BPAP04003 597 aaKnown RBP28.63■■■□□ 2.17
TMEM248-205ENST00000433271 ITGA4P13612 1032 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 ITGB8P26012 769 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 ZACNQ401N2 412 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 JADE1Q6IE81 842 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 TMC6Q7Z403 805 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 NT5DC4Q86YG4 428 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 EFCAB13Q8IY85 973 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 OR5B17Q8NGF7 314 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 LINC01599Q8WXQ3 324 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 TSPAN18Q96SJ8 248 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 CNTN3Q9P232 1028 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 COQ4Q9Y3A0 265 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 C2CD2Q9Y426 696 aa28.63■■■□□ 2.17
TMEM248-205ENST00000433271 SCN5AQ14524 2016 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 FAM189BP81408 668 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 XKR4Q5GH76 650 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 DEFB128Q7Z7B8 93 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 ECHDC2Q86YB7 292 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 PGBD4Q96DM1 585 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 PCMTD1Q96MG8 357 aaPredicted RBP28.62■■■□□ 2.17
TMEM248-205ENST00000433271 PPP1R9BQ96SB3 815 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 GCNT4Q9P109 453 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 DERAQ9Y315 318 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 ANK1P16157 1881 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 TET1Q8NFU7 2136 aa28.62■■■□□ 2.17
TMEM248-205ENST00000433271 NFICP08651 508 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 TFAMQ00059 246 aaKnown RBP28.61■■■□□ 2.17
TMEM248-205ENST00000433271 MFSD5Q6N075 450 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 SPC24Q8NBT2 197 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 CACTINQ8WUQ7 758 aaKnown RBP28.61■■■□□ 2.17
TMEM248-205ENST00000433271 KLK14Q9P0G3 267 aa28.61■■■□□ 2.17
TMEM248-205ENST00000433271 GIT1Q9Y2X7 761 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms