RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 ZNF302Q9NR11 478 aa12.05□□□□□ -0.48
SEC16A-206ENST00000431893 SUPT3HB4E1H0 165 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 F8W8V4 182 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ZNF263O14978 683 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 GRAP2O75791 330 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 TDP2O95551 362 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 AVPR1AP37288 418 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 MED21Q13503 144 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ACSF2Q96CM8 615 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CDHR1Q96JP9 859 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 AGBL1Q96MI9 1066 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 PLXNC1O60486 1568 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 PTPRTO14522 1441 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 NFIBO00712 420 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CAND2O75155 1236 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 SOAT1P35610 550 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 TRIM25Q14258 630 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 SPATA4Q8NEY3 305 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 C9orf72Q96LT7 481 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 EFCAB14O75071 495 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 SRP72O76094 671 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 APRTP07741 180 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 TMED10P49755 219 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CSE1LP55060 971 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CDKL3Q8IVW4 592 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 RHOT1Q8IXI2 618 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 SLC35G2Q8TBE7 412 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 WWP1Q9H0M0 922 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 FAM96AQ9H5X1 160 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 TASP1Q9H6P5 420 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 TRIM45Q9H8W5 580 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 NFKBIL1Q9UBC1 381 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ABT1Q9ULW3 272 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ARL2BPQ9Y2Y0 163 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 C5orf58C9J3I9 102 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ASAP2O43150 1006 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ASMTLO95671 621 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ARL6IP4Q66PJ3 421 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 DDX53Q86TM3 631 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CDR2LQ86X02 465 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CCDC103Q8IW40 242 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ELMOD1Q8N336 334 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CCT8L2Q96SF2 557 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 CCT7Q99832 543 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 BBS2Q9BXC9 721 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 MAGEB5Q9BZ81 275 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ZFATQ9P243 1243 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 hCG_1984214I3L0E3 225 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 TARSP26639 723 aaKnown RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ALCAMQ13740 583 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 TRIP10Q15642 601 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 BNIPLQ7Z465 357 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 ZNF713Q8N859 430 aaPredicted RBP12.04□□□□□ -0.48
SEC16A-206ENST00000431893 PCDHGB4Q9UN71 923 aa12.04□□□□□ -0.48
SEC16A-206ENST00000431893 FASTKD5Q7L8L6 764 aaKnown RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 HORMAD1Q86X24 394 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 SNX31Q8N9S9 440 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 MDM1Q8TC05 714 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 CELF4Q9BZC1 486 aaKnown RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 DLGAP2Q9P1A6 1054 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 CHMP2BQ9UQN3 213 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 MYBP10242 640 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 NMT1P30419 496 aaKnown RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 PFKFB3Q16875 520 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 TMEM117Q9H0C3 514 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 BRD8Q9H0E9 1235 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 MYBL1P10243 752 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 JAK3P52333 1124 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 SLC16A1P53985 500 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 NME5P56597 212 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 ZNF235Q14590 738 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 MFN1Q8IWA4 741 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 AGPAT1Q99943 283 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 KDM4CQ9H3R0 1056 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 IGF2BP3O00425 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 GRIK1P39086 918 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 CCDC33Q8N5R6 958 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 OSBPL3Q9H4L5 887 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 TBC1D23Q9NUY8 699 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 PARVAQ9NVD7 372 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 DDX56Q9NY93 547 aaKnown RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 RBAKQ9NYW8 714 aaPredicted RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 LOC100653049A0A140TA62 436 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 KRT34O76011 436 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 GRK2P25098 689 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 SYTL3Q4VX76 610 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 SUSD4Q5VX71 490 aa12.03□□□□□ -0.48
SEC16A-206ENST00000431893 SNRNP48Q6IEG0 339 aaKnown RBP12.03□□□□□ -0.48
SEC16A-206ENST00000431893 NLRP10Q86W26 655 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms