RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PDZD8Q8NEN9 1154 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 AIFM3Q96NN9 605 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 SNX5Q9Y5X3 404 aa7.95□□□□□ -1.14
SYNPO2-202ENST00000429713 NSFP46459 744 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PTPN12Q05209 780 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 BBS9Q3SYG4 887 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 TRIM65Q6PJ69 517 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ADAT2Q7Z6V5 191 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 SFR1Q86XK3 245 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 TMIEQ8NEW7 156 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 P2RX5Q93086 422 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PBXIP1Q96AQ6 731 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 MRRFQ96E11 262 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 COX4I2Q96KJ9 171 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 MAP3K20Q9NYL2 800 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 TMEM9Q9P0T7 183 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 CEP72Q9P209 647 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 SLC12A4Q9UP95 1085 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 OVOS2A0A0J9YW53 1432 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 OVOS2Q6IE36 1432 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 UNC5CO95185 931 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 THOC5Q13769 683 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 C15orf59Q2T9L4 293 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 RSBN1LQ6PCB5 846 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PI16Q6UXB8 463 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 TMC5Q6UXY8 1006 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 SGF29Q96ES7 293 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ANKZF1Q9H8Y5 726 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 FANCEQ9HB96 536 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ADGRB1O14514 1584 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 H3BQF6 201 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 KATNA1O75449 491 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 S100A9P06702 114 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ALCAMQ13740 583 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 OR9Q1Q8NGQ5 310 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 SEPT1Q8WYJ6 367 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 MCRS1Q96EZ8 462 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ZBTB21Q9ULJ3 1066 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 NOVA2Q9UNW9 492 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 COL3A1P02461 1466 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 IFNAR1P17181 557 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 EIF2B2P49770 351 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 CDK7P50613 346 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 DAB2P98082 770 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PNMA1Q8ND90 353 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PRPF31Q8WWY3 499 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 FAM161BQ96MY7 647 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 GPR101Q96P66 508 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 APOL1O14791 398 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 MRPL28Q13084 256 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ACVR2BQ13705 512 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PDIK1LQ8N165 341 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 FBXL16Q8N461 479 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ARMCX3Q9UH62 379 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 FAM25EA8MYX2 175 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 USP17L12C9JPN9 530 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 USP17L21D6R901 530 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 FAM58BPP0C7Q3 252 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 KRT10P13645 584 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 EIF6P56537 245 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ARMCX4Q5H9R4 360 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 CEP78Q5JTW2 689 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 OLFML2BQ68BL8 750 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 IKBIPQ70UQ0 350 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 FKBP9P1Q75LS8 142 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 GPBP1Q86WP2 473 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 EXOC7Q9UPT5 735 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PALM3A6NDB9 673 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 H3BRJ5 948 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 TPPPO94811 219 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PYGMP11217 842 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 DRG2P55039 364 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 RNF43Q68DV7 783 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ZNF572Q7Z3I7 529 aaPredicted RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 TRIM59Q8IWR1 403 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ELAC2Q9BQ52 826 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 GREM2Q9H772 168 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 ATP8A2Q9NTI2 1148 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 CA4P22748 312 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 LIFRP42702 1097 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 KIF22Q14807 665 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 DHX36Q9H2U1 1008 aaKnown RBP7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 PARVGQ9HBI0 331 aa7.94□□□□□ -1.14
SYNPO2-202ENST00000429713 CRB1P82279 1406 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 PDE9AO76083 593 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 PABPC4LP0CB38 370 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 SLC18A1P54219 525 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 NR1I3Q14994 352 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 PALB2Q86YC2 1186 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 DIP2AQ14689 1571 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 PALLDQ8WX93 1383 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 C3P01024 1663 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 LMO7Q8WWI1 1683 aa7.93□□□□□ -1.14
SYNPO2-202ENST00000429713 NFAT5O94916 1531 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms