RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MMP10P09238 476 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 RARGP13631 454 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 NQO1P15559 274 aaKnown RBP13.31□□□□□ -0.28
CDH3-202ENST00000429102 ZNF131P52739 623 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 FMO1Q01740 532 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 SLMAPQ14BN4 828 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 UGCGQ16739 394 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 GLIS1Q8NBF1 620 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDH3-202ENST00000429102 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 A0A1B0GUA9 196 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 ECE2O60344 883 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
CDH3-202ENST00000429102 OLIG1Q8TAK6 271 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 SPDL1Q96EA4 605 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 TELO2Q9Y4R8 837 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 CBX6O95503 412 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 SLC8A1P32418 973 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 PEX5P50542 639 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 NCALDP61601 193 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 XRCC4Q13426 336 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 NT5C1BQ96P26 610 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 ACCSQ96QU6 501 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 ANKFY1Q9P2R3 1169 aa13.31□□□□□ -0.28
CDH3-202ENST00000429102 EXOC1LA0A1B0GW35 172 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 MIF4GDA9UHW6 222 aaKnown RBP13.3□□□□□ -0.28
CDH3-202ENST00000429102 P3H1Q32P28 736 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 MKL1Q969V6 931 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 PGM2Q96G03 612 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 YIPF3Q9GZM5 350 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 TMEM39BQ9GZU3 492 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 KIAA1551Q9HCM1 1747 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 ATP9AO75110 1047 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 GAS8O95995 478 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 CA4P22748 312 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 CTNNA2P26232 953 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 MFAP3P55082 362 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 SP8Q8IXZ3 490 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 LRRN4Q8WUT4 740 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 PPP1R12CQ9BZL4 782 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 C5orf60A6NFR6 353 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 TBX3O15119 743 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 NUDT17P0C025 328 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 TCF4P15884 667 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 CNGA1P29973 690 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 NOVP48745 357 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 TMEM270Q6UE05 265 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
CDH3-202ENST00000429102 LMO3Q8TAP4 145 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 STMN4Q9H169 189 aaPredicted RBP13.3□□□□□ -0.28
CDH3-202ENST00000429102 AAASQ9NRG9 546 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 PARP2Q9UGN5 583 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 FZD1Q9UP38 647 aa13.3□□□□□ -0.28
CDH3-202ENST00000429102 YWHABP31946 246 aaKnown RBP13.29□□□□□ -0.28
CDH3-202ENST00000429102 NRLP54845 237 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 LACTBP83111 547 aaPredicted RBP13.29□□□□□ -0.28
CDH3-202ENST00000429102 VSTM1Q6UX27 236 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
CDH3-202ENST00000429102 RBM15Q96T37 977 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDH3-202ENST00000429102 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
CDH3-202ENST00000429102 COL20A1Q9P218 1284 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 NCANO14594 1321 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 GTPBP10A4D1E9 387 aaKnown RBP13.29□□□□□ -0.28
CDH3-202ENST00000429102 MAP3K6O95382 1288 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 NSFP46459 744 aaKnown RBP13.29□□□□□ -0.28
CDH3-202ENST00000429102 BMT2Q1RMZ1 405 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 SMTNL2Q2TAL5 461 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 CRY2Q49AN0 593 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 SCARA3Q6AZY7 606 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 COL23A1Q86Y22 540 aaPredicted RBP13.29□□□□□ -0.28
CDH3-202ENST00000429102 MIEF2Q96C03 454 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 TXLNGYQ9BZA5 131 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 CENPFP49454 3210 aa13.29□□□□□ -0.28
CDH3-202ENST00000429102 POLRMTO00411 1230 aaKnown RBP13.28□□□□□ -0.28
CDH3-202ENST00000429102 EIF3DO15371 548 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDH3-202ENST00000429102 PCK1P35558 622 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 COPS2P61201 443 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 ATP11AP98196 1134 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 KIF22Q14807 665 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 EMC10Q5UCC4 262 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 NAIF1Q69YI7 327 aaPredicted RBP13.28□□□□□ -0.28
CDH3-202ENST00000429102 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 PIGWQ7Z7B1 504 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 FNBP1Q96RU3 617 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 TUFT1Q9NNX1 390 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 METTL5Q9NRN9 209 aaKnown RBP13.28□□□□□ -0.28
CDH3-202ENST00000429102 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 PIK3R2O00459 728 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 MGRN1O60291 552 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 FOXN2P32314 431 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 RARRES1P49788 294 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 PLCB4Q15147 1175 aa13.28□□□□□ -0.28
CDH3-202ENST00000429102 SCARA5Q6ZMJ2 495 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms