RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ZNF185O15231 689 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 GSPT1P15170 499 aaKnown RBP5.53□□□□□ -1.52
LINC00397-201ENST00000422074 RNASE9P60153 205 aaKnown RBP5.53□□□□□ -1.52
LINC00397-201ENST00000422074 PTPAQ15257 358 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 TIGD2Q4W5G0 525 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 PDCD4Q53EL6 469 aaKnown RBP5.53□□□□□ -1.52
LINC00397-201ENST00000422074 RRP12Q5JTH9 1297 aaKnown RBP5.53□□□□□ -1.52
LINC00397-201ENST00000422074 ATXN7L2Q5T6C5 722 aaPredicted RBP5.53□□□□□ -1.52
LINC00397-201ENST00000422074 CNTD1Q8N815 330 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 AGAP2Q99490 1192 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 NEU1Q99519 415 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 LANCL2Q9NS86 450 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 MOCS1Q9NZB8 636 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 POGKQ9P215 609 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 PCDHGA2Q9Y5H1 932 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 DMRT1Q9Y5R6 373 aa5.53□□□□□ -1.52
LINC00397-201ENST00000422074 POLR2AP24928 1970 aaKnown RBP5.53□□□□□ -1.52
LINC00397-201ENST00000422074 RAMP2O60895 175 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 NCR1O76036 304 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 OSMP13725 252 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 AFMIDQ63HM1 303 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 KCNV1Q6PIU1 500 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 RHOT2Q8IXI1 618 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 DRC7Q8IY82 874 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 RNF169Q8NCN4 708 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 MRI1Q9BV20 369 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 TEX101Q9BY14 249 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 ZBTB21Q9ULJ3 1066 aa5.52□□□□□ -1.53
LINC00397-201ENST00000422074 SPATA31D3P0C874 917 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 PROZP22891 400 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 CHN2P52757 468 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 PER3P56645 1201 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 INHBEP58166 350 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 KRT85P78386 507 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 ATP8B2P98198 1209 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 NOMO1Q15155 1222 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 SMN1Q16637 294 aaKnown RBP5.51□□□□□ -1.53
LINC00397-201ENST00000422074 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 RNF187Q5TA31 235 aaPredicted RBP5.51□□□□□ -1.53
LINC00397-201ENST00000422074 ARMC6Q6NXE6 501 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 SPATA31D4Q6ZUB0 917 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 SEM1Q6ZVN7 128 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 VRK3Q8IV63 474 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 OR2I1PQ8NGU4 316 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 FUBP1Q96AE4 644 aaKnown RBP5.51□□□□□ -1.53
LINC00397-201ENST00000422074 TTPALQ9BTX7 342 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 FPGT-TNNI3KV9GXZ4 949 aa5.51□□□□□ -1.53
LINC00397-201ENST00000422074 TEX33O43247 280 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 RHOBTB3O94955 611 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 GCP02774 474 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 CFIP05156 583 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 ZEB1P37275 1124 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-201ENST00000422074 MTM1Q13496 603 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 CRB2Q5IJ48 1285 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 AMOTL1Q8IY63 956 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 C1orf162Q8NEQ5 155 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-201ENST00000422074 UHRF1Q96T88 793 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-201ENST00000422074 ADAM2Q99965 735 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 SERHL2Q9H4I8 314 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 KLHL11Q9NVR0 708 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 SYBUQ9NX95 663 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 C11orf21Q9P2W6 132 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 SLC23A1Q9UHI7 598 aa5.5□□□□□ -1.53
LINC00397-201ENST00000422074 AJAP1Q9UKB5 411 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-201ENST00000422074 B3GALT2O43825 422 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 LPXNO60711 386 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 NDUFA10O95299 355 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 POMCP01189 267 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 AMY1AP04745 511 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 HLA-DOAP06340 250 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 ATP5JP18859 108 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 TGM1P22735 817 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 PCSK1P29120 753 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 ALDH1A3P47895 512 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 AMPD3Q01432 767 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 SYDE2Q5VT97 1194 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 SENP6Q9GZR1 1112 aaPredicted RBP5.49□□□□□ -1.53
LINC00397-201ENST00000422074 TOR3AQ9H497 397 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 MANSC1Q9H8J5 431 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 TMEM140Q9NV12 185 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 PACSIN3Q9UKS6 424 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 ATP11BQ9Y2G3 1177 aa5.49□□□□□ -1.53
LINC00397-201ENST00000422074 USP15Q9Y4E8 981 aaPredicted RBP5.49□□□□□ -1.53
LINC00397-201ENST00000422074 PIPSLA2A3N6 862 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 FZD9O00144 591 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 CDK11BP21127 795 aaKnown RBP5.48□□□□□ -1.53
LINC00397-201ENST00000422074 FPR1P21462 350 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 GCSHP23434 173 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 ADRA1BP35368 520 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 UBXN2BQ14CS0 331 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 Q6YL49 198 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 CPEB3Q8NE35 698 aaKnown RBP5.48□□□□□ -1.53
LINC00397-201ENST00000422074 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC00397-201ENST00000422074 FBXO18Q8NFZ0 1043 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 OR56A1Q8NGH5 318 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 STON2Q8WXE9 905 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 JADE3Q92613 823 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 FUBP3Q96I24 572 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC00397-201ENST00000422074 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
LINC00397-201ENST00000422074 COQ10AQ96MF6 247 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms