RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SMIM23A6NLE4 172 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 ACTN2P35609 894 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 PLTPP55058 493 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 NNTQ13423 1086 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 LBX2Q6XYB7 198 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 C18orf8Q96DM3 657 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 NLRP4Q96MN2 994 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 NRBP2Q9NSY0 501 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 ANAPC7Q9UJX3 599 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 SYNGAP1Q96PV0 1343 aa11.75□□□□□ -0.53
DDX56-203ENST00000421223 GSTTP1A0A1W2PQM5 241 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 TCRBV7S2A1N4TA0A589 114 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 GJB6O95452 261 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 Q3C1V9 767 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 HSDL1Q3SXM5 330 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 GJC2Q5T442 439 aaPredicted RBP11.74□□□□□ -0.53
DDX56-203ENST00000421223 FBXO16Q8IX29 292 aaPredicted RBP11.74□□□□□ -0.53
DDX56-203ENST00000421223 THNSL1Q8IYQ7 743 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 CHST13Q8NET6 341 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 MFSD14AQ96MC6 490 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 SENP7Q9BQF6 1050 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 HAPLN2Q9GZV7 340 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 ASCC2Q9H1I8 757 aaPredicted RBP11.74□□□□□ -0.53
DDX56-203ENST00000421223 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 PTPRJQ12913 1337 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 CLDN3O15551 220 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 EXTL3O43909 919 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 CFHP08603 1231 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 PYGMP11217 842 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 CTNNA1P35221 906 aaKnown RBP11.74□□□□□ -0.53
DDX56-203ENST00000421223 TNFSF9P41273 254 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 DR1Q01658 176 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 CDR2Q01850 454 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 DHX9Q08211 1270 aaKnown RBP11.74□□□□□ -0.53
DDX56-203ENST00000421223 ODF2Q5BJF6 829 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 SEL1L2Q5TEA6 688 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 TDRD10Q5VZ19 366 aaKnown RBP11.74□□□□□ -0.53
DDX56-203ENST00000421223 RHPN2Q8IUC4 686 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 RNF149Q8NC42 400 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 OR5B17Q8NGF7 314 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 FAM118BQ9BPY3 351 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 C17orf75Q9HAS0 396 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 ARHGAP28Q9P2N2 729 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 TMEM59LQ9UK28 342 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 NCANO14594 1321 aa11.74□□□□□ -0.53
DDX56-203ENST00000421223 CCDC188H7C350 402 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 TULP2O00295 520 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 EDN1P05305 212 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 MAPK4P31152 587 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
DDX56-203ENST00000421223 GPC3P51654 580 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 PPFIA1Q13136 1202 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 TTMPQ5BVD1 217 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 SCARA5Q6ZMJ2 495 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 CCDC25Q86WR0 208 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 CCDC105Q8IYK2 499 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 CYFIP2Q96F07 1278 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 C11orf70Q9BRQ4 267 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 FAM107BQ9H098 131 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 PORCNQ9H237 461 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 UMODL1Q5DID0 1318 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 FER1L6Q2WGJ9 1857 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 TLDC2A0PJX2 215 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 GOLGA6L10A6NI86 522 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 FARP2O94887 1054 aaPredicted RBP11.73□□□□□ -0.53
DDX56-203ENST00000421223 ARIH2O95376 493 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 GNGT1P63211 74 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 ALS2CLQ60I27 953 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 CCDC50Q8IVM0 306 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 CAVIN3Q969G5 261 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 HEMGNQ9BXL5 484 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
DDX56-203ENST00000421223 FHDC1Q9C0D6 1143 aaPredicted RBP11.73□□□□□ -0.53
DDX56-203ENST00000421223 PDLIM7Q9NR12 457 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 DAAM1Q9Y4D1 1078 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 NFASCO94856 1347 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 LTBP3Q9NS15 1303 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 GARTP22102 1010 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 SCP2P22307 547 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 RRM1P23921 792 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 VPS41P49754 854 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 SNRPFP62306 86 aaKnown RBP11.73□□□□□ -0.53
DDX56-203ENST00000421223 TFAMQ00059 246 aaKnown RBP11.73□□□□□ -0.53
DDX56-203ENST00000421223 PDCLQ13371 301 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 CAPSQ13938 189 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 KCTD2Q14681 263 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 C1orf54Q8WWF1 131 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 SEPT1Q8WYJ6 367 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 HVCN1Q96D96 273 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 PCYT2Q99447 389 aa11.73□□□□□ -0.53
DDX56-203ENST00000421223 MAFBQ9Y5Q3 323 aaPredicted RBP11.73□□□□□ -0.53
DDX56-203ENST00000421223 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 KIAA1217Q5T5P2 1943 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 CLGNO14967 610 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 ATP2A1O14983 1001 aa11.72□□□□□ -0.53
DDX56-203ENST00000421223 THAP12O43422 761 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms