RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 URGCPQ8TCY9 931 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 HVCN1Q96D96 273 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 MRPL38Q96DV4 380 aaKnown RBP11.52□□□□□ -0.57
RFC1-203ENST00000418436 ZBTB45Q96K62 511 aaPredicted RBP11.52□□□□□ -0.57
RFC1-203ENST00000418436 ZFP42Q96MM3 310 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 ZNF558Q96NG5 402 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 PANK4Q9NVE7 773 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 SNTG2Q9NY99 539 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 SERTAD1Q9UHV2 236 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 INPP5FQ9Y2H2 1132 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 REV3LO60673 3130 aa11.52□□□□□ -0.57
RFC1-203ENST00000418436 PDCD11Q14690 1871 aaKnown RBP11.51□□□□□ -0.57
RFC1-203ENST00000418436 CARNS1A5YM72 827 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 FGF18O76093 207 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 RECQL4O94761 1208 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 POMCP01189 267 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 GALTP07902 379 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 IDEP14735 1019 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 DNAJB1P25685 340 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 GRM5P41594 1212 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 SCNN1GP51170 649 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 NDUFA8P51970 172 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 BCAR1P56945 870 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 UBE3AQ05086 875 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 MCL1Q07820 350 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 EHHADHQ08426 723 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 DSC1Q08554 894 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 PTPROQ16827 1216 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 ZNF568Q3ZCX4 644 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 HERC4Q5GLZ8 1057 aaPredicted RBP11.51□□□□□ -0.57
RFC1-203ENST00000418436 CCDC65Q8IXS2 484 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 SLC39A11Q8N1S5 342 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 MRPS27Q92552 414 aaKnown RBP11.51□□□□□ -0.57
RFC1-203ENST00000418436 TMEM175Q9BSA9 504 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 HAPLN2Q9GZV7 340 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 MRPL44Q9H9J2 332 aaKnown RBP11.51□□□□□ -0.57
RFC1-203ENST00000418436 ALG13Q9NP73 1137 aaKnown RBP11.51□□□□□ -0.57
RFC1-203ENST00000418436 SPG21Q9NZD8 308 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 CHMP5Q9NZZ3 219 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 DNAJB4Q9UDY4 337 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 PARP2Q9UGN5 583 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 LZTS1Q9Y250 596 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 EYSQ5T1H1 3165 aa11.51□□□□□ -0.57
RFC1-203ENST00000418436 PTGESO14684 152 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 CLDN3O15551 220 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 PPM1AP35813 382 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 PBX3P40426 434 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 SYKP43405 635 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 ALDH7A1P49419 539 aaKnown RBP11.5□□□□□ -0.57
RFC1-203ENST00000418436 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
RFC1-203ENST00000418436 GRIK3Q13003 919 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 COASYQ13057 564 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 CUL4BQ13620 913 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 ALCAMQ13740 583 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 NOLC1Q14978 699 aaKnown RBP eCLIP11.5□□□□□ -0.57
RFC1-203ENST00000418436 NAB2Q15742 525 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 XKR4Q5GH76 650 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 SLC39A4Q6P5W5 647 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 ALKAL1Q6UXT8 129 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 UNC13DQ70J99 1090 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 ZBTB33Q86T24 672 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 COLGALT2Q8IYK4 626 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 THNSL1Q8IYQ7 743 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 CEP57L1Q8IYX8 460 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 CEP120Q8N960 986 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 FSIP1Q8NA03 581 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 POF1BQ8WVV4 589 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 PAGE5Q96GU1 130 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 TCHPQ9BT92 498 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 FGFBP2Q9BYJ0 223 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 CXCL16Q9H2A7 254 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 KLK14Q9P0G3 267 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 TBC1D7Q9P0N9 293 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 GDAQ9Y2T3 454 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 STYXL1Q9Y6J8 313 aa11.5□□□□□ -0.57
RFC1-203ENST00000418436 ANK1P16157 1881 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 PVALEFA0A1B0GWK0 134 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 NT5C1B-RDH14C9J2C7 533 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 ANKRD63C9JTQ0 380 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 HNRNPDLO14979 420 aaKnown RBP11.49□□□□□ -0.57
RFC1-203ENST00000418436 MEFVO15553 781 aaPredicted RBP11.49□□□□□ -0.57
RFC1-203ENST00000418436 FAM189A1O60320 539 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 ZC3H11AO75152 810 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFC1-203ENST00000418436 ALDH2P05091 517 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 MYL1P05976 194 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 CASP1P29466 404 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 AFMP43652 599 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 SLC11A1P49279 550 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 LIG4P49917 911 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 CASP5P51878 434 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 ASIC1P78348 528 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 KCNA1Q09470 495 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 L1TD1Q5T7N2 865 aaKnown RBP11.49□□□□□ -0.57
RFC1-203ENST00000418436 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
RFC1-203ENST00000418436 GRAMD1CQ8IYS0 662 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 BICD1Q96G01 975 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms