RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ANKRD54Q6NXT1 300 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 FOXD4L3Q6VB84 417 aaPredicted RBP22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 DYMQ7RTS9 669 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 MAP4K3Q8IVH8 894 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 KLHL5Q96PQ7 755 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 RPS6KC1Q96S38 1066 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 CNTN3Q9P232 1028 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 STK39Q9UEW8 545 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 PCDHA7Q9UN72 937 aa22.59■■□□□ 1.21
PKNOX1-202ENST00000418336 CASTOR2A6NHX0 329 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 K7ENM7 598 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 CNPP09543 421 aaKnown RBP22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 KCNE1P15382 129 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 OSTNP61366 133 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 DSG1Q02413 1049 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 ZP2Q05996 745 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 STRN3Q13033 797 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 HSP90AA2PQ14568 343 aaPredicted RBP22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 NOLC1Q14978 699 aaKnown RBP eCLIP22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 SEZ6Q53EL9 994 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 ZC2HC1CQ53FD0 456 aaPredicted RBP22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 ATL3Q6DD88 541 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 LLGL2Q6P1M3 1020 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 FUT10Q6P4F1 479 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 CCDC73Q6ZRK6 1079 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 SFR1Q86XK3 245 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 FGFBP2Q9BYJ0 223 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 IKZF4Q9H2S9 585 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 RXFP1Q9HBX9 757 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 KBTBD4Q9NVX7 518 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 RCOR1Q9UKL0 485 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 ADAM28Q9UKQ2 775 aa22.58■■□□□ 1.21
PKNOX1-202ENST00000418336 CITO14578 2027 aa22.58■■□□□ 1.2
PKNOX1-202ENST00000418336 PLXNA3P51805 1871 aa22.58■■□□□ 1.2
PKNOX1-202ENST00000418336 H0YCG3 227 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 EPCAMP16422 314 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 SCP2P22307 547 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 TXLNAP40222 546 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 CLCN4P51793 760 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 SLC10A6Q3KNW5 377 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 ZBTB41Q5SVQ8 909 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 SV2BQ7L1I2 683 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 ZNF720Q7Z2F6 126 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 C3orf58Q8NDZ4 430 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 B3GALT6Q96L58 329 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 COLEC11Q9BWP8 271 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 GOLGA2P5Q9HBQ8 144 aa22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 USP15Q9Y4E8 981 aaPredicted RBP22.57■■□□□ 1.2
PKNOX1-202ENST00000418336 TMEM189-UBE2V1I3L0A0 370 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 ADRB2P07550 413 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 TNFSF9P41273 254 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 STAT6P42226 847 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 UPP1Q16831 310 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 TMEM130Q8N3G9 435 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 PDILTQ8N807 584 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 KCNG4Q8TDN1 519 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 CCDC94Q9BW85 323 aaPredicted RBP22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 ANKFY1Q9P2R3 1169 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 PRKAG3Q9UGI9 489 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 CDH22Q9UJ99 828 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 STYXL1Q9Y6J8 313 aa22.56■■□□□ 1.2
PKNOX1-202ENST00000418336 A0A0B4J269 797 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 TISP43B9A030 160 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 ANKRD63C9JTQ0 380 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 TBCAO75347 108 aaKnown RBP22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 KRT18P05783 430 aaKnown RBP22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 CASP5P51878 434 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 KCNA1Q09470 495 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 RTP2Q5QGT7 225 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 APBB1IPQ7Z5R6 666 aaPredicted RBP22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 ADHFE1Q8IWW8 467 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 GPR65Q8IYL9 337 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 HASPINQ8TF76 798 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 ACAP3Q96P50 834 aa22.55■■□□□ 1.2
PKNOX1-202ENST00000418336 TTC26A0AVF1 554 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 TEX28O15482 410 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 HARSP12081 509 aaKnown RBP22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 GLUD2P49448 558 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 CLCNKBP51801 687 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 RESP18Q5W5W9 173 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 CNNM4Q6P4Q7 775 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 STAMQ92783 540 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 CASP10Q92851 521 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 TCHPQ9BT92 498 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 OLFML3Q9NRN5 406 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 MRPL17Q9NRX2 175 aaKnown RBP22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 SEL1LQ9UBV2 794 aa22.54■■□□□ 1.2
PKNOX1-202ENST00000418336 CLDN3O15551 220 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 NR1I2O75469 434 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 PAPLNO95428 1278 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 ADSSP30520 456 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 ZBTB6Q15916 424 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 KANK3Q6NY19 840 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 GJD3Q8N144 294 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 C18orf25Q96B23 403 aaPredicted RBP22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 TNMDQ9H2S6 317 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 ZHX3Q9H4I2 956 aa22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 TOPORSQ9NS56 1045 aaPredicted RBP22.53■■□□□ 1.2
PKNOX1-202ENST00000418336 ANK1P16157 1881 aa22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 C2CD2LO14523 706 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms