RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 CEP57Q86XR8 500 aa18.08■□□□□ 0.48
PRPF18-203ENST00000417658 POLR3FQ9H1D9 316 aaPredicted RBP18.08■□□□□ 0.48
PRPF18-203ENST00000417658 FZD8Q9H461 694 aa18.08■□□□□ 0.48
PRPF18-203ENST00000417658 PRMT7Q9NVM4 692 aaPredicted RBP18.08■□□□□ 0.48
PRPF18-203ENST00000417658 SPATA6Q9NWH7 488 aaPredicted RBP18.08■□□□□ 0.48
PRPF18-203ENST00000417658 KCNH3Q9ULD8 1083 aa18.08■□□□□ 0.48
PRPF18-203ENST00000417658 PCDHGA2Q9Y5H1 932 aa18.08■□□□□ 0.48
PRPF18-203ENST00000417658 MYH15Q9Y2K3 1946 aa18.08■□□□□ 0.48
PRPF18-203ENST00000417658 FAM170BA6NMN3 283 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 KIF4AO95239 1232 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 SDHBP21912 280 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 SCRN1Q12765 414 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 EARS2Q5JPH6 523 aaKnown RBP18.07■□□□□ 0.48
PRPF18-203ENST00000417658 VARS2Q5ST30 1063 aaKnown RBP18.07■□□□□ 0.48
PRPF18-203ENST00000417658 ATRIPQ8WXE1 791 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 CCDC43Q96MW1 224 aaKnown RBP18.07■□□□□ 0.48
PRPF18-203ENST00000417658 TTC12Q9H892 705 aaPredicted RBP18.07■□□□□ 0.48
PRPF18-203ENST00000417658 GJB4Q9NTQ9 266 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 PDRG1Q9NUG6 133 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 CACNG4Q9UBN1 327 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 POLIQ9UNA4 740 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 MTF2Q9Y483 593 aaPredicted RBP18.07■□□□□ 0.48
PRPF18-203ENST00000417658 MIA3Q5JRA6 1907 aa18.07■□□□□ 0.48
PRPF18-203ENST00000417658 CASTOR2A6NHX0 329 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 PTGESO14684 152 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 CCL16O15467 120 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 UBXN2BQ14CS0 331 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 NAB2Q15742 525 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 ZBTB41Q5SVQ8 909 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 AXDND1Q5T1B0 1012 aaPredicted RBP18.06■□□□□ 0.48
PRPF18-203ENST00000417658 CDCA2Q69YH5 1023 aaPredicted RBP18.06■□□□□ 0.48
PRPF18-203ENST00000417658 ZBTB44Q8NCP5 570 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 ITFG1Q8TB96 612 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 PIGOQ8TEQ8 1089 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 HASPINQ8TF76 798 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 WASF1Q92558 559 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 CLDN23Q96B33 292 aa18.06■□□□□ 0.48
PRPF18-203ENST00000417658 LRRIQ4A6NIV6 560 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 N4BP3O15049 544 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 NCAM2O15394 837 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 ADAM12O43184 909 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 OR1D2P34982 312 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 CSTF1Q05048 431 aaKnown RBP18.05■□□□□ 0.48
PRPF18-203ENST00000417658 CALCRLQ16602 461 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 RSPO4Q2I0M5 234 aaPredicted RBP18.05■□□□□ 0.48
PRPF18-203ENST00000417658 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
PRPF18-203ENST00000417658 ZBTB8OSQ8IWT0 167 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 NPAS3Q8IXF0 933 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 MCPH1Q8NEM0 835 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 SLC7A14Q8TBB6 771 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 NELL1Q92832 810 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 TNFRSF25Q93038 417 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 LTB4R2Q9NPC1 389 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 ZSCAN32Q9NX65 697 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 GDE1Q9NZC3 331 aa18.05■□□□□ 0.48
PRPF18-203ENST00000417658 TMEM189-UBE2V1I3L0A0 370 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 PFKFB2O60825 505 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 ECI2O75521 394 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 FGFR3P22607 806 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 KRT2P35908 639 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 RPS9P46781 194 aaKnown RBP18.04■□□□□ 0.48
PRPF18-203ENST00000417658 NR5A1Q13285 461 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 PABPC1LQ4VXU2 614 aaKnown RBP18.04■□□□□ 0.48
PRPF18-203ENST00000417658 SECISBP2LQ93073 1101 aaKnown RBP18.04■□□□□ 0.48
PRPF18-203ENST00000417658 KXD1Q9BQD3 176 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 C2orf40Q9H1Z8 148 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 PDZD7Q9H5P4 517 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 GPRC5CQ9NQ84 441 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 AVENQ9NQS1 362 aaPredicted RBP18.04■□□□□ 0.48
PRPF18-203ENST00000417658 SNTG2Q9NY99 539 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 NCDNQ9UBB6 729 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 DNMT3BQ9UBC3 853 aaKnown RBP18.04■□□□□ 0.48
PRPF18-203ENST00000417658 MTRRQ9UBK8 725 aa18.04■□□□□ 0.48
PRPF18-203ENST00000417658 TPRP12270 2363 aaKnown RBP18.04■□□□□ 0.48
PRPF18-203ENST00000417658 NOTCH4Q99466 2003 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 FAM205CA6NFA0 338 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 USO1O60763 962 aaKnown RBP18.03■□□□□ 0.48
PRPF18-203ENST00000417658 LILRB5O75023 590 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 RECQL4O94761 1208 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 TXKP42681 527 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
PRPF18-203ENST00000417658 PRPF4BQ13523 1007 aaKnown RBP18.03■□□□□ 0.48
PRPF18-203ENST00000417658 MAPK6Q16659 721 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 MTMR9Q96QG7 549 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 ADPGKQ9BRR6 497 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 FAM126AQ9BYI3 521 aaPredicted RBP18.03■□□□□ 0.48
PRPF18-203ENST00000417658 HCFC1R1Q9NWW0 138 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 ORC3Q9UBD5 711 aaPredicted RBP18.03■□□□□ 0.48
PRPF18-203ENST00000417658 MRPS17Q9Y2R5 130 aaKnown RBP18.03■□□□□ 0.48
PRPF18-203ENST00000417658 BACE2Q9Y5Z0 518 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 CACNA1BQ00975 2339 aa18.03■□□□□ 0.48
PRPF18-203ENST00000417658 ACKR2O00590 384 aa18.02■□□□□ 0.48
PRPF18-203ENST00000417658 SPATA31C1P0DKV0 1188 aa18.02■□□□□ 0.48
PRPF18-203ENST00000417658 ATP2B1P20020 1258 aa18.02■□□□□ 0.48
PRPF18-203ENST00000417658 CD72P21854 359 aa18.02■□□□□ 0.48
PRPF18-203ENST00000417658 ZNF852Q6ZMS4 543 aa18.02■□□□□ 0.48
PRPF18-203ENST00000417658 MAEAQ7L5Y9 396 aa18.02■□□□□ 0.48
PRPF18-203ENST00000417658 EPC1Q9H2F5 836 aa18.02■□□□□ 0.48
PRPF18-203ENST00000417658 TUFT1Q9NNX1 390 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms