RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 CNPP09543 421 aaKnown RBP11.21□□□□□ -0.61
HDLBP-206ENST00000417540 GRM5P41594 1212 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 STAT6P42226 847 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 EFNA5P52803 228 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 HSP90AA2PQ14568 343 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-206ENST00000417540 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 ANKRD54Q6NXT1 300 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 CD300LGQ6UXG3 332 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 DDX53Q86TM3 631 aaKnown RBP11.21□□□□□ -0.61
HDLBP-206ENST00000417540 MAP4K3Q8IVH8 894 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 CNNM3Q8NE01 707 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 DHX58Q96C10 678 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 BICD1Q96G01 975 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 FAM193BQ96PV7 902 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-206ENST00000417540 ADPGKQ9BRR6 497 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 LRFN3Q9BTN0 628 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 ZSCAN16Q9H4T2 348 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-206ENST00000417540 TMEM134Q9H6X4 195 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 PARVGQ9HBI0 331 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 RNF216Q9NWF9 866 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-206ENST00000417540 ODF2LQ9ULJ1 636 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 FAN1Q9Y2M0 1017 aa11.21□□□□□ -0.61
HDLBP-206ENST00000417540 VPS13AQ96RL7 3174 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 USP34Q70CQ2 3546 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-206ENST00000417540 ANKRD63C9JTQ0 380 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 K7ERI5 159 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 HNRNPDLO14979 420 aaKnown RBP11.2□□□□□ -0.62
HDLBP-206ENST00000417540 PPP1R37O75864 691 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 YEATS4O95619 227 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 URODP06132 367 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 BRCC3P46736 316 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 GLUD2P49448 558 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 CLCNKBP51801 687 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 TUSC3Q13454 348 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 SMAD2Q15796 467 aaKnown RBP11.2□□□□□ -0.62
HDLBP-206ENST00000417540 RARS2Q5T160 578 aaKnown RBP11.2□□□□□ -0.62
HDLBP-206ENST00000417540 HAUS6Q7Z4H7 955 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 FAM178BQ8IXR5 827 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 HACE1Q8IYU2 909 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 MYCT1Q8N699 235 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 MRPL43Q8N983 215 aaKnown RBP11.2□□□□□ -0.62
HDLBP-206ENST00000417540 DDX12PQ92771 950 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 ADAM28Q9UKQ2 775 aa11.2□□□□□ -0.62
HDLBP-206ENST00000417540 MORC2Q9Y6X9 1032 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-206ENST00000417540 TECTAO75443 2155 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 TEX28O15482 410 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 LILRB3O75022 631 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 NFICP08651 508 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 MCF2P10911 925 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 TKTP29401 623 aaKnown RBP11.19□□□□□ -0.62
HDLBP-206ENST00000417540 DDIT3P35638 169 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 CLCN4P51793 760 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 KRT17Q04695 432 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 MCL1Q07820 350 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 COASYQ13057 564 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 AAK1Q2M2I8 961 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 RRAGBQ5VZM2 374 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 SCARA3Q6AZY7 606 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 SLC22A17Q8WUG5 538 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 SUSD6Q92537 303 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 KLHL5Q96PQ7 755 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 S1PR5Q9H228 398 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 POMKQ9H5K3 350 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 NGRNQ9NPE2 291 aaKnown RBP11.19□□□□□ -0.62
HDLBP-206ENST00000417540 MAN1C1Q9NR34 630 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 KCND2Q9NZV8 630 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 CNTN3Q9P232 1028 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 TBX20Q9UMR3 447 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 PCDHA7Q9UN72 937 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 OBSL1O75147 1896 aa11.19□□□□□ -0.62
HDLBP-206ENST00000417540 PODXLO00592 558 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 SLC26A4O43511 780 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 TRAK2O60296 914 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 PPP6R2O75170 966 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 TOM1L1O75674 476 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 RFPL2O75678 378 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 CXCL14O95715 111 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 PIGRP01833 764 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 SPATA31D3P0C874 917 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 TXLNAP40222 546 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 MATR3P43243 847 aaKnown RBP eCLIP11.18□□□□□ -0.629e-7■■■■■ 26.8
HDLBP-206ENST00000417540 LIG4P49917 911 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 DSG1Q02413 1049 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 NCBP1Q09161 790 aaKnown RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 STRN3Q13033 797 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 ENOX2Q16206 610 aaKnown RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 SLC10A6Q3KNW5 377 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 XKR4Q5GH76 650 aa11.18□□□□□ -0.62
HDLBP-206ENST00000417540 RSPO2Q6UXX9 243 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-206ENST00000417540 TMC5Q6UXY8 1006 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms