RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 NCAM2O15394 837 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 USO1O60763 962 aaKnown RBP11.1□□□□□ -0.63
MDC1-202ENST00000416571 THP07101 528 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 SDHBP21912 280 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 HOXA9P31269 272 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 ARL2P36404 184 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 MAGEA9P43362 315 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 CSTF1Q05048 431 aaKnown RBP11.1□□□□□ -0.63
MDC1-202ENST00000416571 SPIRE1Q08AE8 756 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 ZNF528Q3MIS6 628 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 ZBTB8OSQ8IWT0 167 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
MDC1-202ENST00000416571 LNX1Q8TBB1 728 aaPredicted RBP11.1□□□□□ -0.63
MDC1-202ENST00000416571 SLC7A14Q8TBB6 771 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 CLSTN3Q9BQT9 956 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 PAAF1Q9BRP4 392 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 ADPGKQ9BRR6 497 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 OSBPL6Q9BZF3 934 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 CACNG4Q9UBN1 327 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 FBXO4Q9UKT5 387 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 GPR179Q6PRD1 2367 aa11.1□□□□□ -0.63
MDC1-202ENST00000416571 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 CACNA1IQ9P0X4 2223 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 FAM170BA6NMN3 283 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 N4BP3O15049 544 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 KIF4AO95239 1232 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 LYPLA2O95372 231 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 RARRES1P49788 294 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 CALCRLQ16602 461 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 RSPO4Q2I0M5 234 aaPredicted RBP11.09□□□□□ -0.63
MDC1-202ENST00000416571 UVSSAQ2YD98 709 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 PABPC1LQ4VXU2 614 aaKnown RBP11.09□□□□□ -0.63
MDC1-202ENST00000416571 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
MDC1-202ENST00000416571 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
MDC1-202ENST00000416571 RSPO2Q6UXX9 243 aaPredicted RBP11.09□□□□□ -0.63
MDC1-202ENST00000416571 MAEAQ7L5Y9 396 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 SUMF1Q8NBK3 374 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 PIGOQ8TEQ8 1089 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 WASF1Q92558 559 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 KXD1Q9BQD3 176 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 DDX23Q9BUQ8 820 aaKnown RBP11.09□□□□□ -0.63
MDC1-202ENST00000416571 TTC12Q9H892 705 aaPredicted RBP11.09□□□□□ -0.63
MDC1-202ENST00000416571 LTB4R2Q9NPC1 389 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 PDRG1Q9NUG6 133 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 PCDHGA2Q9Y5H1 932 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 OTOGLQ3ZCN5 2332 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 DOCK6Q96HP0 2047 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 WDR87Q6ZQQ6 2873 aa11.09□□□□□ -0.63
MDC1-202ENST00000416571 EPB41L2O43491 1005 aaKnown RBP11.08□□□□□ -0.64
MDC1-202ENST00000416571 RECQL4O94761 1208 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 OR1D2P34982 312 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 KRT2P35908 639 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 TXKP42681 527 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 SCRN1Q12765 414 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
MDC1-202ENST00000416571 TPRG1Q6ZUI0 275 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 MAML2Q8IZL2 1156 aaPredicted RBP11.08□□□□□ -0.64
MDC1-202ENST00000416571 MCPH1Q8NEM0 835 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 ITFG1Q8TB96 612 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 ING5Q8WYH8 240 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 NELL2Q99435 816 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 HSD17B14Q9BPX1 270 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 TM6SF1Q9BZW5 370 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 C2orf40Q9H1Z8 148 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 GJB4Q9NTQ9 266 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
MDC1-202ENST00000416571 KCNH3Q9ULD8 1083 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 MRPS17Q9Y2R5 130 aaKnown RBP11.08□□□□□ -0.64
MDC1-202ENST00000416571 MRPS23Q9Y3D9 190 aaKnown RBP11.08□□□□□ -0.64
MDC1-202ENST00000416571 USP24Q9UPU5 2620 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 FAM208BQ5VWN6 2430 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 COL4A3Q01955 1670 aa11.08□□□□□ -0.64
MDC1-202ENST00000416571 FAM205CA6NFA0 338 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 TRAPPC3O43617 180 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 POU2F2P09086 479 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 LIG1P18858 919 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 CD72P21854 359 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 NR5A1Q13285 461 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 PRPF4BQ13523 1007 aaKnown RBP11.07□□□□□ -0.64
MDC1-202ENST00000416571 RAB33AQ14088 237 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 MAPK6Q16659 721 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
MDC1-202ENST00000416571 RTL10Q7L3V2 364 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 NPAS3Q8IXF0 933 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 PDZD7Q9H5P4 517 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 GPRC5CQ9NQ84 441 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 HCFC1R1Q9NWW0 138 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 ZSCAN32Q9NX65 697 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 DNMT3BQ9UBC3 853 aaKnown RBP11.07□□□□□ -0.64
MDC1-202ENST00000416571 MTRRQ9UBK8 725 aa11.07□□□□□ -0.64
MDC1-202ENST00000416571 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
MDC1-202ENST00000416571 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
MDC1-202ENST00000416571 MTF2Q9Y483 593 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms