RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.43
SCN4B-202ENST00000415030 KRT16P08779 473 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 ACADSP16219 412 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 PAPOLAP51003 745 aaKnown RBP12.33□□□□□ -0.43
SCN4B-202ENST00000415030 PARP6Q2NL67 630 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 LRRC23Q53EV4 343 aaPredicted RBP12.33□□□□□ -0.43
SCN4B-202ENST00000415030 DCAF15Q66K64 600 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 TTBK2Q6IQ55 1244 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.43
SCN4B-202ENST00000415030 CCDC127Q96BQ5 260 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 ARHGEF26Q96DR7 871 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 PHTF1Q9UMS5 762 aa12.33□□□□□ -0.43
SCN4B-202ENST00000415030 CHRNA5P30532 468 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 DTNBP1Q96EV8 351 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 CENPKQ9BS16 269 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 PAPOLBQ9NRJ5 636 aaKnown RBP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 ZDHHC18Q9NUE0 388 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 SPAG7O75391 227 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 ATF7P17544 494 aaPredicted RBP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 TARSP26639 723 aaKnown RBP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 PRELPP51888 382 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 BLMHQ13867 455 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 BMT2Q1RMZ1 405 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 PAF1Q8N7H5 531 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 RBM15Q96T37 977 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 NKRFO15226 690 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 RCN2Q14257 317 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 RASA3Q14644 834 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 DCUN1D2Q6PH85 259 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 MFN1Q8IWA4 741 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCN4B-202ENST00000415030 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.44
SCN4B-202ENST00000415030 TJP1Q07157 1748 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 EIF4E1BA6NMX2 242 aaKnown RBP12.32□□□□□ -0.44
SCN4B-202ENST00000415030 VCAM1P19320 739 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 JAM2P57087 298 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 DNAJC3Q13217 504 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 DYDC2Q96IM9 177 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 C9orf72Q96LT7 481 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 AGPAT3Q9NRZ7 376 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 CYP39A1Q9NYL5 469 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 MAGEA4P43358 317 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 ARFIP2P53365 341 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 PPATQ06203 517 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 KIF22Q14807 665 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 RBM41Q96IZ5 413 aaKnown RBP12.32□□□□□ -0.44
SCN4B-202ENST00000415030 ZNF577Q9BSK1 485 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 CTNNAL1Q9UBT7 734 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 HAO1Q9UJM8 370 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 AKAP11Q9UKA4 1901 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 A0A0G2JND7 137 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 PTPN4P29074 926 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 KLHL38Q2WGJ6 581 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 RINT1Q6NUQ1 792 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 RTFDC1Q9BY42 306 aaPredicted RBP12.32□□□□□ -0.44
SCN4B-202ENST00000415030 ARHGEF3Q9NR81 526 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 DLGAP2Q9P1A6 1054 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 PCDHA3Q9Y5H8 950 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 SCINQ9Y6U3 715 aa12.32□□□□□ -0.44
SCN4B-202ENST00000415030 BAG2O95816 211 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 MT-ND3P03897 115 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
SCN4B-202ENST00000415030 CUL3Q13618 768 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 ECM1Q16610 540 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 TBC1D16Q8TBP0 767 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 ALKBH8Q96BT7 664 aaKnown RBP12.31□□□□□ -0.44
SCN4B-202ENST00000415030 RUSC1Q9BVN2 902 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 ABT1Q9ULW3 272 aaKnown RBP12.31□□□□□ -0.44
SCN4B-202ENST00000415030 NAALADL1Q9UQQ1 740 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 MRPL11Q9Y3B7 192 aaKnown RBP12.31□□□□□ -0.44
SCN4B-202ENST00000415030 RSPH10B2B2RC85 870 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 TJP3O95049 919 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 RSPH10BP0C881 870 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 ENOSF1Q7L5Y1 443 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 PCGF5Q86SE9 256 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 ST13P4Q8IZP2 240 aaPredicted RBP12.31□□□□□ -0.44
SCN4B-202ENST00000415030 RBBP8NLQ8NC74 664 aaPredicted RBP12.31□□□□□ -0.44
SCN4B-202ENST00000415030 ERVK-5Q9HDB9 667 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 ZBTB21Q9ULJ3 1066 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 CYP26A1O43174 497 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 GJB6O95452 261 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 PYGMP11217 842 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 CASP5P51878 434 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 Q4G0T1 1027 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 KRT39Q6A163 491 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 CCDC110Q8TBZ0 833 aa12.31□□□□□ -0.44
SCN4B-202ENST00000415030 PYROXD1Q8WU10 500 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms