RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 KCNE1P15382 129 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 VAMP7P51809 220 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 EPHB4P54760 987 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 DLG4P78352 724 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 FPGSQ05932 587 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 PPIGQ13427 754 aaKnown RBP eCLIP14.43□□□□□ -0.1
CNN3-203ENST00000415017 IKBKEQ14164 716 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 SURF1Q15526 300 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 NAB2Q15742 525 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 MAN2A1Q16706 1144 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 TMEM132AQ24JP5 1023 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 RASIP1Q5U651 963 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 DEFB128Q7Z7B8 93 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 NT5DC4Q86YG4 428 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 RDH13Q8NBN7 331 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 CXorf38Q8TB03 319 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 ZNF516Q92618 1163 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 TUBGCP2Q9BSJ2 902 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 CCDC94Q9BW85 323 aaPredicted RBP14.43□□□□□ -0.1
CNN3-203ENST00000415017 CXCL16Q9H2A7 254 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 UBN1Q9NPG3 1134 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 TMEM161AQ9NX61 479 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 PRKAG2Q9UGJ0 569 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 GIT1Q9Y2X7 761 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 DERAQ9Y315 318 aa14.43□□□□□ -0.1
CNN3-203ENST00000415017 PTPRJQ12913 1337 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 MEIS3P2A8K0S8 358 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 LACTBL1A8MY62 500 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 CXCL8P10145 99 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 GTF2H1P32780 548 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 MATR3P43243 847 aaKnown RBP eCLIP14.42□□□□□ -0.17e-7■□□□□ 11.2
CNN3-203ENST00000415017 COPB1P53618 953 aaKnown RBP14.42□□□□□ -0.1
CNN3-203ENST00000415017 TPM4P67936 248 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 PPP3CAQ08209 521 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 GSE1Q14687 1217 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 NR1I3Q14994 352 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 HSP90AA4PQ58FG1 418 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 WDR49Q8IV35 697 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 RSPH1Q8WYR4 309 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 PGBD4Q96DM1 585 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 TRIM6Q9C030 488 aaPredicted RBP14.42□□□□□ -0.1
CNN3-203ENST00000415017 RPF1Q9H9Y2 349 aaKnown RBP14.42□□□□□ -0.1
CNN3-203ENST00000415017 PDE11AQ9HCR9 933 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
CNN3-203ENST00000415017 COQ4Q9Y3A0 265 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 C2CD2Q9Y426 696 aa14.42□□□□□ -0.1
CNN3-203ENST00000415017 PTGESO14684 152 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 OFD1O75665 1012 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 C4BPAP04003 597 aaKnown RBP14.41□□□□□ -0.1
CNN3-203ENST00000415017 HARSP12081 509 aaKnown RBP14.41□□□□□ -0.1
CNN3-203ENST00000415017 ITGA4P13612 1032 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 AKAP5P24588 427 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 AP3M2P53677 418 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 OSTNP61366 133 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 FANCCQ00597 558 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 CCDC40Q4G0X9 1142 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 TMEM240Q5SV17 173 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 DPY19L2P1Q6NXN4 242 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 EFCAB13Q8IY85 973 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 TOP1MTQ969P6 601 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 ZMAT2Q96NC0 199 aaKnown RBP14.41□□□□□ -0.1
CNN3-203ENST00000415017 NAP1L5Q96NT1 182 aaPredicted RBP14.41□□□□□ -0.1
CNN3-203ENST00000415017 PPP1R10Q96QC0 940 aaKnown RBP14.41□□□□□ -0.1
CNN3-203ENST00000415017 CGRRF1Q99675 332 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 NDST4Q9H3R1 872 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 RC3H2Q9HBD1 1191 aaKnown RBP14.41□□□□□ -0.1
CNN3-203ENST00000415017 TOPORSQ9NS56 1045 aaPredicted RBP14.41□□□□□ -0.1
CNN3-203ENST00000415017 INTS13Q9NVM9 706 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 SCN1AP35498 2009 aa14.41□□□□□ -0.1
CNN3-203ENST00000415017 SMIM28A0A1B0GU29 152 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 GTPBP10A4D1E9 387 aaKnown RBP14.4□□□□□ -0.1
CNN3-203ENST00000415017 GOLGA6L3A6NEY3 463 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 P4HA2O15460 535 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 KRT13P13646 458 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 PBX1P40424 430 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 WDR5P61964 334 aaKnown RBP14.4□□□□□ -0.1
CNN3-203ENST00000415017 KCNH2Q12809 1159 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 ZACNQ401N2 412 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 VWA3BQ502W6 1294 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 CLLU1OSQ5K130 101 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 PSRC1Q6PGN9 363 aaPredicted RBP14.4□□□□□ -0.1
CNN3-203ENST00000415017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.4□□□□□ -0.1
CNN3-203ENST00000415017 USP37Q86T82 979 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 NPAS4Q8IUM7 802 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 HACE1Q8IYU2 909 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 HERVK_113Q902F9 699 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 DPF3Q92784 378 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 LPPQ93052 612 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 POP1Q99575 1024 aaKnown RBP14.4□□□□□ -0.1
CNN3-203ENST00000415017 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.4□□□□□ -0.1
CNN3-203ENST00000415017 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
CNN3-203ENST00000415017 MIOSQ9NXC5 875 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 PCDH10Q9P2E7 1040 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 MAGEC2Q9UBF1 373 aaPredicted RBP14.4□□□□□ -0.1
CNN3-203ENST00000415017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.4□□□□□ -0.1
CNN3-203ENST00000415017 NR2E3Q9Y5X4 410 aa14.4□□□□□ -0.1
CNN3-203ENST00000415017 ARL5CA6NH57 179 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 LGALS16A8MUM7 142 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 STX10O60499 249 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms