RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 HSD3B7Q9H2F3 369 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 KANSL3Q9P2N6 904 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 PCDHB7Q9Y5E2 793 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 PMM2O15305 246 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 INPPL1O15357 1258 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 P4HA2O15460 535 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 AMHP03971 560 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 CETN1Q12798 172 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 XKR4Q5GH76 650 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 GLB1LQ6UWU2 654 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 NPAS4Q8IUM7 802 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 WDR49Q8IV35 697 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 EEF2KMTQ96G04 330 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 NXF3Q9H4D5 531 aaKnown RBP20.24■□□□□ 0.83
CDC42-204ENST00000411827 SLC38A7Q9NVC3 462 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 SNTG2Q9NY99 539 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 CNTN3Q9P232 1028 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 PARP2Q9UGN5 583 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 LRFN2Q9ULH4 789 aa20.24■□□□□ 0.83
CDC42-204ENST00000411827 ALPK3Q96L96 1907 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 CARNS1A5YM72 827 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 CBFA2T2O43439 604 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 RECQL4O94761 1208 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 KCNE1P15382 129 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 GSE1Q14687 1217 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 SLC10A6Q3KNW5 377 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 SARM1Q6SZW1 724 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 ALKAL1Q6UXT8 129 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 CEP120Q8N960 986 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 SNX27Q96L92 541 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 RSAD1Q9HA92 442 aa20.23■□□□□ 0.83
CDC42-204ENST00000411827 SERPINC1P01008 464 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 CXCL8P10145 99 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 TNFSF9P41273 254 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 KCNJ6P48051 423 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 OSTNP61366 133 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 KRT31Q15323 416 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 DUOXA2Q1HG44 320 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 CREBRFQ8IUR6 639 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 LINC01599Q8WXQ3 324 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 SLC35C1Q96A29 364 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 CCDC127Q96BQ5 260 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 VWCEQ96DN2 955 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 RPS6KC1Q96S38 1066 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 CGRRF1Q99675 332 aa20.22■□□□□ 0.83
CDC42-204ENST00000411827 FSD2A1L4K1 749 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
CDC42-204ENST00000411827 AFPP02771 609 aaKnown RBP20.21■□□□□ 0.83
CDC42-204ENST00000411827 TNNI1P19237 187 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 CYP3A5P20815 502 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 VWA3BQ502W6 1294 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 ZBTB41Q5SVQ8 909 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 FKBP15Q5T1M5 1219 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 PRPF38BQ5VTL8 546 aaKnown RBP20.21■□□□□ 0.83
CDC42-204ENST00000411827 TCERG1LQ5VWI1 586 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 ABI1Q8IZP0 508 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 PHOSPHO2Q8TCD6 241 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 URGCPQ8TCY9 931 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 ANKRD36BP1Q96IX9 119 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 MRPL9Q9BYD2 267 aaKnown RBP20.21■□□□□ 0.83
CDC42-204ENST00000411827 NDST4Q9H3R1 872 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 PDE11AQ9HCR9 933 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 HES2Q9Y543 173 aa20.21■□□□□ 0.83
CDC42-204ENST00000411827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.2■□□□□ 0.82
CDC42-204ENST00000411827 LACTBL1A8MY62 500 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 TNNC2P02585 160 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 ATF7P17544 494 aaPredicted RBP20.2■□□□□ 0.82
CDC42-204ENST00000411827 PAX3P23760 479 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 MRE11P49959 708 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 COPB1P53618 953 aaKnown RBP20.2■□□□□ 0.82
CDC42-204ENST00000411827 FANCCQ00597 558 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 TMEM132DQ14C87 1099 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 SEZ6Q53EL9 994 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 DCAF17Q5H9S7 520 aaPredicted RBP20.2■□□□□ 0.82
CDC42-204ENST00000411827 AGMOQ6ZNB7 445 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 CRIPAKQ8N1N5 446 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 HERVK_113Q902F9 699 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 FAM212AQ96EL1 285 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 TMEM8AQ9HCN3 771 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
CDC42-204ENST00000411827 ZMYND8Q9ULU4 1186 aaPredicted RBP20.2■□□□□ 0.82
CDC42-204ENST00000411827 UBQLN1Q9UMX0 589 aaKnown RBP20.2■□□□□ 0.82
CDC42-204ENST00000411827 ARL5CA6NH57 179 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 LGALS16A8MUM7 142 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 THP07101 528 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 DLATP10515 647 aaKnown RBP20.19■□□□□ 0.82
CDC42-204ENST00000411827 ATP1A3P13637 1013 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 SYN1P17600 705 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 AKAP5P24588 427 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 UBASH3AP57075 661 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 KCNH2Q12809 1159 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 GRIK3Q13003 919 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 TMEM240Q5SV17 173 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 KRT39Q6A163 491 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 SMYD5Q6GMV2 418 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 ZNF365Q70YC5 407 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 RNF169Q8NCN4 708 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 ZSWIM2Q8NEG5 633 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 BEST2Q8NFU1 509 aa20.19■□□□□ 0.82
CDC42-204ENST00000411827 TOP1MTQ969P6 601 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms