RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 EHD2Q9NZN4 543 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 ZHX2Q9Y6X8 837 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 TMEM120BA0PK00 339 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 CYP26A1O43174 497 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 RXRBP28702 533 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 NMT1P30419 496 aaKnown RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 MRPS35P82673 323 aaKnown RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 SWSAP1Q6NVH7 229 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 FUCA2Q9BTY2 467 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 CPS1P31327 1500 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 ENO4A6NNW6 628 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 PPP1R12AO14974 1030 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 PDIA6Q15084 440 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 C9orf72Q96LT7 481 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 FNDC3AQ9Y2H6 1198 aaKnown RBP11.31□□□□□ -0.6
PBRM1-205ENST00000409057 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
PBRM1-205ENST00000409057 CEMIPQ8WUJ3 1361 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 ATP8B3O60423 1300 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 CUL3Q13618 768 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 MAPRE2Q15555 327 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 WRNIP1Q96S55 665 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 ALG13Q9NP73 1137 aaKnown RBP11.3□□□□□ -0.6
PBRM1-205ENST00000409057 DDX42Q86XP3 938 aaKnown RBP eCLIP11.3□□□□□ -0.6
PBRM1-205ENST00000409057 NPHS2Q9NP85 383 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 PSMC3IPQ9P2W1 217 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-205ENST00000409057 PLAGL2Q9UPG8 496 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 HPS5Q9UPZ3 1129 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 FLT1P17948 1338 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 MYMKA6NI61 221 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 MAN1A2O60476 641 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 DNAJC6O75061 913 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 HNRNPCP07910 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
PBRM1-205ENST00000409057 KLRC1P26715 233 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 RCOR2Q8IZ40 523 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 NCLNQ969V3 563 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 MTRQ99707 1265 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 SUCLA2Q9P2R7 463 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-205ENST00000409057 ENO1P06733 434 aaKnown RBP11.3□□□□□ -0.6
PBRM1-205ENST00000409057 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 PPARGP37231 505 aaPredicted RBP11.3□□□□□ -0.6
PBRM1-205ENST00000409057 FMO5P49326 533 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 PCYT1AP49585 367 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 AP1B1Q10567 949 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 CNGA3Q16281 694 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 P3H1Q32P28 736 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 GPD1LQ8N335 351 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 TTC39CQ8N584 583 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 TTC8Q8TAM2 541 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 TUFT1Q9NNX1 390 aa11.3□□□□□ -0.6
PBRM1-205ENST00000409057 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 PIK3R2O00459 728 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 CAMTA2O94983 1202 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 KCNA3P22001 575 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 HDAC4P56524 1084 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 RWDD4Q6NW29 188 aaKnown RBP11.29□□□□□ -0.6
PBRM1-205ENST00000409057 CYB5D1Q6P9G0 228 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 ANKMY2Q8IV38 441 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 UBN1Q9NPG3 1134 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
PBRM1-205ENST00000409057 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
PBRM1-205ENST00000409057 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 SLC26A4O43511 780 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 HSD17B3P37058 310 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 PHKA2P46019 1235 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.6
PBRM1-205ENST00000409057 TMEM154Q6P9G4 183 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 CLEC10AQ8IUN9 316 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 ZNF302Q9NR11 478 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
PBRM1-205ENST00000409057 NEU2Q9Y3R4 380 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 PCDHA10Q9Y5I2 948 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 H3BRJ5 948 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 M0QYV0 167 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 FDX1P10109 184 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 PRLRP16471 622 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
PBRM1-205ENST00000409057 AP3M2P53677 418 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 CDH6P55285 790 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 POU5F1BQ06416 359 aa11.29□□□□□ -0.6
PBRM1-205ENST00000409057 NFX1Q12986 1120 aaKnown RBP11.29□□□□□ -0.6
PBRM1-205ENST00000409057 DSTYKQ6XUX3 929 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms