RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 TSEN34Q9BSV6 310 aaKnown RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 SUDS3Q9H7L9 328 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 EPN1Q9Y6I3 576 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 NDUFS2O75306 463 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 GNRH1P01148 92 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 SNX1Q13596 522 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 KRT71Q3SY84 523 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 LMBRD2Q68DH5 695 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 CNPY4Q8N129 248 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 LINC00301Q8NCQ3 95 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 FBXL13Q8NEE6 735 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 TEKT4Q8WW24 435 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 TAAR1Q96RJ0 339 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 ABI2Q9NYB9 513 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 TRPM5Q9NZQ8 1165 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 WDR35Q9P2L0 1181 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 SCAF8Q9UPN6 1271 aaKnown RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 PRG3Q9Y2Y8 225 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 TRPV2Q9Y5S1 764 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 KIF3CO14782 793 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 NFRKBQ6P4R8 1299 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 CENPUQ71F23 418 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 ULK4Q96C45 1275 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 KIAA1683Q9H0B3 1180 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 DDX41Q9UJV9 622 aaKnown RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 IQANK1A0A1B0GTG1 560 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 RASA1P20936 1047 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 AKT1P31749 480 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 GPC5P78333 572 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 TCP11X2Q5H9J9 407 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 SZRD1Q7Z422 152 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 MORC4Q8TE76 937 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 NT5C1AQ9BXI3 368 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 SELENONQ9NZV5 590 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 CNOT8Q9UFF9 292 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 COL14A1Q05707 1796 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 RPS6P62753 249 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 PRAMEP78395 509 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ACVR2BQ13705 512 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 PCNX4Q63HM2 1172 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 RASSF3Q86WH2 238 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 EGFL8Q99944 293 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 EIF4E1BA6NMX2 242 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 EBAG9O00559 213 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 BUB1BO60566 1050 aaPredicted RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 CAND2O75155 1236 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 TDP2O95551 362 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 PSEN2P49810 448 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 NBPF20Q3BBV1 942 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP47-203ENST00000399455 CCDC149Q6ZUS6 474 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 LZICQ8WZA0 190 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ARHGEF2Q92974 986 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 RABEP2Q9H5N1 569 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 PXMP2Q9NR77 195 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 DPP3Q9NY33 737 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 EMSYQ7Z589 1322 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 SALL1Q9NSC2 1324 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 PGRMC1O00264 195 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 RASGRF2O14827 1237 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 THP07101 528 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 TGFB3P10600 412 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 PAX3P23760 479 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ROR1Q01973 937 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ZNF177Q13360 481 aaPredicted RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 CUL1Q13616 776 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 FRMD5Q7Z6J6 570 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 HSPBP1Q9NZL4 362 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ANAPC7Q9UJX3 599 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ZKSCAN5Q9Y2L8 839 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 TMX2Q9Y320 296 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 MUTP22033 750 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 LHX1P48742 406 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 NOP14P78316 857 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 EHHADHQ08426 723 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 NECTIN1Q15223 517 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 DBN1Q16643 649 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 VSIG1Q86XK7 387 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ANKRD42Q8N9B4 389 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 SARS2Q9NP81 518 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 BCL9O00512 1426 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 MYL4P12829 197 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 CDC25BP30305 580 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 PPIGQ13427 754 aaKnown RBP eCLIP8.42□□□□□ -1.069e-6■■□□□ 12.8
USP47-203ENST00000399455 RBBP7Q16576 425 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 ANKRD40Q6AI12 368 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 SGMS1Q86VZ5 419 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 FTHL17Q9BXU8 183 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 NFKBIZQ9BYH8 718 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 DPH5Q9H2P9 285 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 DHX35Q9H5Z1 703 aaKnown RBP8.42□□□□□ -1.06
USP47-203ENST00000399455 SENP1Q9P0U3 644 aa8.42□□□□□ -1.06
USP47-203ENST00000399455 GLTPD2A6NH11 291 aa8.41□□□□□ -1.06
USP47-203ENST00000399455 HMGCRP04035 888 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms