RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 KIAA1841Q6NSI8 718 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 CEP120Q8N960 986 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 EPSTI1Q96J88 318 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 RIPOR3Q96MK2 946 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 UROC1Q96N76 676 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 APOL5Q9BWW9 433 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 SFXN1Q9H9B4 322 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 C11orf16Q9NQ32 467 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 FNIP2Q9P278 1114 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 DPP7Q9UHL4 492 aa16.3■□□□□ 0.2
SMIM11A-203ENST00000399299 FAM13AO94988 1023 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 KIF4AO95239 1232 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 ABCD1P33897 745 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 DDIT3P35638 169 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 TXLNAP40222 546 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 ELAVL2Q12926 359 aaKnown RBP16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 DHX8Q14562 1220 aaKnown RBP16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 MCM6Q14566 821 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 SLC39A14Q15043 492 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 RARS2Q5T160 578 aaKnown RBP16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 ELMSAN1Q6PJG2 1045 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 ALKAL1Q6UXT8 129 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 HSCBQ8IWL3 235 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 SNX27Q96L92 541 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 ACAP3Q96P50 834 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 LRFN3Q9BTN0 628 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 CACNG4Q9UBN1 327 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 VWA8A3KMH1 1905 aa16.29■□□□□ 0.2
SMIM11A-203ENST00000399299 C2orf16Q68DN1 1984 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 SMIM28A0A1B0GU29 152 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 GLUD1P00367 558 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 MCL1Q07820 350 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 GLRA4Q5JXX5 417 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 USP49Q70CQ1 688 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 ZBTB33Q86T24 672 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 C12orf76Q8N812 135 aaPredicted RBP16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 CMASQ8NFW8 434 aaPredicted RBP16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 HDAC7Q8WUI4 952 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 RABGGTAQ92696 567 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 ZBTB45Q96K62 511 aaPredicted RBP16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 RHOBTB2Q9BYZ6 727 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 POMKQ9H5K3 350 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 SLC38A7Q9NVC3 462 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 CNTN3Q9P232 1028 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 MUTYHQ9UIF7 546 aa16.28■□□□□ 0.2
SMIM11A-203ENST00000399299 CLDN3O15551 220 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 TRAK2O60296 914 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 TBCAO75347 108 aaKnown RBP16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 PIGRP01833 764 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 KRT18P05783 430 aaKnown RBP16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 KCNE1P15382 129 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 OSTNP61366 133 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 CEBPZQ03701 1054 aaKnown RBP16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 UPP1Q16831 310 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 SPECC1Q5M775 1068 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 ATAT1Q5SQI0 421 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 PDXDC1Q6P996 788 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 DCLRE1AQ6PJP8 1040 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 C15orf39Q6ZRI6 1047 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 GPR149Q86SP6 731 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 MYCT1Q8N699 235 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 HASPINQ8TF76 798 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 PIK3R5Q8WYR1 880 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 B3GALT6Q96L58 329 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 CLIC6Q96NY7 704 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 TTPALQ9BTX7 342 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 MAN1C1Q9NR34 630 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 ANKFY1Q9P2R3 1169 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 CDH22Q9UJ99 828 aa16.27■□□□□ 0.2
SMIM11A-203ENST00000399299 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 PRR33A8MZF0 331 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 K7ENM7 598 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 PAPLNO95428 1278 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 COL9A1P20849 921 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 CLCNKBP51801 687 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 RTP2Q5QGT7 225 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 FAM171A1Q5VUB5 890 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 TMC5Q6UXY8 1006 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 CYP26C1Q6V0L0 522 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 BICD1Q96G01 975 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 DDX27Q96GQ7 796 aaKnown RBP16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 FIZ1Q96SL8 496 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 ST6GALNAC4Q9H4F1 302 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 PLEKHA4Q9H4M7 779 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms