RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MREGQ8N565 214 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 TTLL6Q8N841 843 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 SPIRE2Q8WWL2 714 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 ATP6V0A1Q93050 837 aa5.26□□□□□ -1.57
SMAD4-202ENST00000398417 RANBP17Q9H2T7 1088 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 CNOT10Q9H9A5 744 aaKnown RBP5.26□□□□□ -1.57
SMAD4-202ENST00000398417 DCDC2CA8MYV0 355 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 TLR3O15455 904 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 RARRES1P49788 294 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 MMP14P50281 582 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PPATQ06203 517 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SPIRE1Q08AE8 756 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ORC1Q13415 861 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ALCAMQ13740 583 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SLC47A2Q86VL8 602 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 FBXO41Q8TF61 875 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 UBIAD1Q9Y5Z9 338 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 NCANO14594 1321 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 BMT2Q1RMZ1 405 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ATP13A4Q4VNC1 1196 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 TMC3Q7Z5M5 1100 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PCSK1NQ9UHG2 260 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 FER1L4A9Z1Z3 1794 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 MARK3P27448 753 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 GNPTABQ3T906 1256 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 BTNL9Q6UXG8 535 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PALM2Q8IXS6 379 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ARHGAP18Q8N392 663 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PLEKHO2Q8TD55 490 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 BSNDQ8WZ55 320 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ARHGEF2Q92974 986 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ZBTB45Q96K62 511 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ALG13Q9NP73 1137 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 RYDENQ9NUL5 291 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 FRMPD4Q14CM0 1322 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 FAM107AO95990 144 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ITGB5P18084 799 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 HMGCS2P54868 508 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 JAM2P57087 298 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 BYSLQ13895 437 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 CLEC16AQ2KHT3 1053 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DUPD1Q68J44 220 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ANKRD35Q8N283 1001 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 RASGEF1CQ8N431 466 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 HES6Q96HZ4 224 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 TRIM7Q9C029 511 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DCLK3Q9C098 648 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 GPATCH2LQ9NWQ4 482 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SLC9A2Q9UBY0 812 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SERPINA10Q9UK55 444 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SPATA31A6Q5VVP1 1343 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ZC3H4Q9UPT8 1303 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PIK3R2O00459 728 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PODXLO00592 558 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 RIPK2O43353 540 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 STAM2O75886 525 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 VIL1P09327 827 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ZSCAN5DPP0CG00 497 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 KRT10P13645 584 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 MAP2K2P36507 400 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 TEX2Q8IWB9 1127 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SRRM1Q8IYB3 904 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 C4orf33Q8N1A6 199 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 BBOF1Q8ND07 529 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ALG3Q92685 438 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 AKT1S1Q96B36 256 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 LENG9Q96B70 501 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 RUNDC3BQ96NL0 473 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 NCAPGQ9BPX3 1015 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DDX23Q9BUQ8 820 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 KLC4Q9NSK0 619 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PCDHA10Q9Y5I2 948 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 WDR46O15213 610 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ZNF131P52739 623 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 RPS6P62753 249 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 FMO1Q01740 532 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 CXCL9Q07325 125 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 MTM1Q13496 603 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 NAA25Q14CX7 972 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 STYK1Q6J9G0 422 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 RTKN2Q8IZC4 609 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 KIF2BQ8N4N8 673 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 LRRC71Q8N4P6 559 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 PRELID2Q8N945 189 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ZKSCAN4Q969J2 545 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 KLHL29Q96CT2 875 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 MOV10L1Q9BXT6 1211 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 FAM129AQ9BZQ8 928 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 ZNF302Q9NR11 478 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DMAC2Q9NW81 257 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 COL20A1Q9P218 1284 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 DDX20Q9UHI6 824 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 HERC5Q9UII4 1024 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 GTF3C4Q9UKN8 822 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 TELO2Q9Y4R8 837 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 SGK1O00141 431 aa5.25□□□□□ -1.57
SMAD4-202ENST00000398417 KIAA0391O15091 583 aaKnown RBP5.25□□□□□ -1.57
SMAD4-202ENST00000398417 HNRNPCL1O60812 293 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms