RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 TMED8Q6PL24 325 aaPredicted RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 SLC7A14Q8TBB6 771 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 NR1H4Q96RI1 486 aaPredicted RBP12.01□□□□□ -0.49
TTC28-201ENST00000397906 KIFC3Q9BVG8 833 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 PNPLA7Q6ZV29 1317 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 PODXLO00592 558 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 MCEEQ96PE7 176 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
TTC28-201ENST00000397906 KRT38O76015 456 aa12□□□□□ -0.49
TTC28-201ENST00000397906 KRT7P08729 469 aa12□□□□□ -0.49
TTC28-201ENST00000397906 NT5C2P49902 561 aa12□□□□□ -0.49
TTC28-201ENST00000397906 MFN1Q8IWA4 741 aa12□□□□□ -0.49
TTC28-201ENST00000397906 RAB42Q8N4Z0 105 aa12□□□□□ -0.49
TTC28-201ENST00000397906 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
TTC28-201ENST00000397906 CHRNA3P32297 505 aa12□□□□□ -0.49
TTC28-201ENST00000397906 YME1L1Q96TA2 773 aa12□□□□□ -0.49
TTC28-201ENST00000397906 TRIM54Q9BYV2 358 aa12□□□□□ -0.49
TTC28-201ENST00000397906 SMYD3Q9H7B4 428 aa12□□□□□ -0.49
TTC28-201ENST00000397906 TPX2Q9ULW0 747 aaKnown RBP12□□□□□ -0.49
TTC28-201ENST00000397906 DCDC2CA8MYV0 355 aa12□□□□□ -0.49
TTC28-201ENST00000397906 IFNA8P32881 189 aa12□□□□□ -0.49
TTC28-201ENST00000397906 SNX17Q15036 470 aa12□□□□□ -0.49
TTC28-201ENST00000397906 TAAR1Q96RJ0 339 aa12□□□□□ -0.49
TTC28-201ENST00000397906 PVALEFA0A1B0GWK0 134 aa12□□□□□ -0.49
TTC28-201ENST00000397906 ENTPD3O75355 529 aa12□□□□□ -0.49
TTC28-201ENST00000397906 NUGGCQ68CJ6 796 aa12□□□□□ -0.49
TTC28-201ENST00000397906 CCDC124Q96CT7 223 aaKnown RBP12□□□□□ -0.49
TTC28-201ENST00000397906 ZC3H11AO75152 810 aaKnown RBP eCLIP12□□□□□ -0.49
TTC28-201ENST00000397906 ESRRAP11474 423 aaPredicted RBP12□□□□□ -0.49
TTC28-201ENST00000397906 PPP3CCP48454 512 aa12□□□□□ -0.49
TTC28-201ENST00000397906 SEZ6Q53EL9 994 aa12□□□□□ -0.49
TTC28-201ENST00000397906 BARGINQ6ZT62 677 aa12□□□□□ -0.49
TTC28-201ENST00000397906 OTULINQ96BN8 352 aa12□□□□□ -0.49
TTC28-201ENST00000397906 UBA3Q8TBC4 463 aa12□□□□□ -0.49
TTC28-201ENST00000397906 OPTNQ96CV9 577 aa12□□□□□ -0.49
TTC28-201ENST00000397906 EFHD1Q9BUP0 239 aa12□□□□□ -0.49
TTC28-201ENST00000397906 HPS4Q9NQG7 708 aa12□□□□□ -0.49
TTC28-201ENST00000397906 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
TTC28-201ENST00000397906 CDC42EP1Q00587 391 aa12□□□□□ -0.49
TTC28-201ENST00000397906 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
TTC28-201ENST00000397906 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
TTC28-201ENST00000397906 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
TTC28-201ENST00000397906 EEF2KO00418 725 aaKnown RBP12□□□□□ -0.49
TTC28-201ENST00000397906 ARHGEF7Q14155 803 aa12□□□□□ -0.49
TTC28-201ENST00000397906 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
TTC28-201ENST00000397906 E2F8A0AVK6 867 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 DNAJB2P25686 324 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 SESN2P58004 480 aaPredicted RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 FBXO16Q8IX29 292 aaPredicted RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 KRT14P02533 472 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 WEE2P0C1S8 567 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 AP3M2P53677 418 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 CUL1Q13616 776 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 DDX56Q9NY93 547 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 TLR2O60603 784 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 MYBL1P10243 752 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 HOXA7P31268 230 aaPredicted RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 EIF3EP60228 445 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 CDKL3Q8IVW4 592 aaPredicted RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 RFWD2Q8NHY2 731 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 SERPINI1Q99574 410 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 TRPV6Q9H1D0 765 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 KCNH7Q9NS40 1196 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 HSPA8P11142 646 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 ORC1Q13415 861 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 PPHLN1Q8NEY8 458 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 SCFD2Q8WU76 684 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 MOV10L1Q9BXT6 1211 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 KPNA7A9QM74 516 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 NCOA4Q13772 614 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ARHGAP15Q53QZ3 475 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 DCAF6Q58WW2 860 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 EPM2AIP1Q7L775 607 aaPredicted RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 PARD6BQ9BYG5 372 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 KIF17Q9P2E2 1029 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 DIAPH2O60879 1101 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ARSEP51690 589 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ADCY2Q08462 1091 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 KIZQ2M2Z5 673 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ANKMY2Q8IV38 441 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 USP42Q9H9J4 1324 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 SPAG7O75391 227 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 HARS2P49590 506 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 SV2CQ496J9 727 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 RHOT1Q8IXI2 618 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ZNF212Q9UDV6 495 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ARHGAP10A1A4S6 786 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ZNF286BP0CG31 522 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ATP2C1P98194 919 aaPredicted RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 ALX1Q15699 326 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 KCNA2P16389 499 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 TTC39CQ8N584 583 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 EXOC4Q96A65 974 aa11.99□□□□□ -0.49
TTC28-201ENST00000397906 ERLEC1Q96DZ1 483 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms