RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 UBAP2Q5T6F2 1119 aaKnown RBP17.85■□□□□ 0.45
PRDM5-202ENST00000394435 PHLDB2Q86SQ0 1253 aa17.85■□□□□ 0.45
PRDM5-202ENST00000394435 USP37Q86T82 979 aa17.85■□□□□ 0.45
PRDM5-202ENST00000394435 MICALL1Q8N3F8 863 aa17.85■□□□□ 0.45
PRDM5-202ENST00000394435 NSUN6Q8TEA1 469 aaKnown RBP17.85■□□□□ 0.45
PRDM5-202ENST00000394435 POLR3FQ9H1D9 316 aaPredicted RBP17.85■□□□□ 0.45
PRDM5-202ENST00000394435 PABPC3Q9H361 631 aaKnown RBP17.85■□□□□ 0.45
PRDM5-202ENST00000394435 JPH1Q9HDC5 661 aaPredicted RBP17.85■□□□□ 0.45
PRDM5-202ENST00000394435 MTUS1Q9ULD2 1270 aa17.85■□□□□ 0.45
PRDM5-202ENST00000394435 MAFGO15525 162 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 DGAT1O75907 488 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 PRAMEF18Q5VWM3 479 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 PACS2Q86VP3 889 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 MICALL2Q8IY33 904 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 MCPH1Q8NEM0 835 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 CYP26B1Q9NR63 512 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 SLC9A2Q9UBY0 812 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 FAM107AO95990 144 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 GARTP22102 1010 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 HMGCS2P54868 508 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 ACTR2P61160 394 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 CYP1B1Q16678 543 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 MTERF2Q49AM1 385 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 BRDTQ58F21 947 aaPredicted RBP17.84■□□□□ 0.45
PRDM5-202ENST00000394435 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
PRDM5-202ENST00000394435 SCYL3Q8IZE3 742 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 ATP6V0A4Q9HBG4 840 aa17.84■□□□□ 0.45
PRDM5-202ENST00000394435 DKC1O60832 514 aaKnown RBP eCLIP17.83■□□□□ 0.45
PRDM5-202ENST00000394435 NUDT17P0C025 328 aa17.83■□□□□ 0.45
PRDM5-202ENST00000394435 GMPSP49915 693 aaPredicted RBP17.83■□□□□ 0.45
PRDM5-202ENST00000394435 MKRN4PQ13434 485 aaPredicted RBP17.83■□□□□ 0.45
PRDM5-202ENST00000394435 TTC31Q49AM3 519 aaPredicted RBP17.83■□□□□ 0.45
PRDM5-202ENST00000394435 DENND2CQ68D51 928 aa17.83■□□□□ 0.45
PRDM5-202ENST00000394435 ZNF280CQ8ND82 737 aa17.83■□□□□ 0.45
PRDM5-202ENST00000394435 UHMK1Q8TAS1 419 aaKnown RBP17.83■□□□□ 0.45
PRDM5-202ENST00000394435 PSPC1Q8WXF1 523 aaKnown RBP17.83■□□□□ 0.45
PRDM5-202ENST00000394435 TLCD1Q96CP7 247 aa17.83■□□□□ 0.45
PRDM5-202ENST00000394435 IFT74Q96LB3 600 aa17.83■□□□□ 0.45
PRDM5-202ENST00000394435 TRIM7Q9C029 511 aa17.83■□□□□ 0.45
PRDM5-202ENST00000394435 SEMA4AQ9H3S1 761 aa17.83■□□□□ 0.45
PRDM5-202ENST00000394435 DOCK1Q14185 1865 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 TLDC2A0PJX2 215 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 GMNCA6NCL1 334 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 SRRM3A6NNA2 597 aaPredicted RBP17.83■□□□□ 0.44
PRDM5-202ENST00000394435 CLDN3O15551 220 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 DSG3P32926 999 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 WNT7BP56706 349 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 GCNT1Q02742 428 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 SLC29A2Q14542 456 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 TMEM132BQ14DG7 1078 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 HOOK3Q86VS8 718 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 CPA5Q8WXQ8 436 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 C1orf112Q9NSG2 853 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 ARHGAP28Q9P2N2 729 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 ANAPC7Q9UJX3 599 aa17.83■□□□□ 0.44
PRDM5-202ENST00000394435 ZNF214Q9UL59 606 aaPredicted RBP17.83■□□□□ 0.44
PRDM5-202ENST00000394435 RLFQ13129 1914 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 SMIM23A6NLE4 172 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 PTPRAP18433 802 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 MAPK4P31152 587 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 LIG4P49917 911 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 C2CD6Q53TS8 623 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 LLGL2Q6P1M3 1020 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 ABHD15Q6UXT9 468 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 MDM1Q8TC05 714 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 C1orf54Q8WWF1 131 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 RAPGEF5Q92565 580 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 WRNIP1Q96S55 665 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 PAGR1Q9BTK6 254 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 AS3MTQ9HBK9 375 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 MTRF1LQ9UGC7 380 aaKnown RBP17.82■□□□□ 0.44
PRDM5-202ENST00000394435 PARP2Q9UGN5 583 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 GJA3Q9Y6H8 435 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 TRAPPC3O43617 180 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 KIAA0754O94854 1291 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 UNGP13051 313 aaPredicted RBP17.82■□□□□ 0.44
PRDM5-202ENST00000394435 RTP1P59025 263 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 SPOPLQ6IQ16 392 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 C15orf39Q6ZRI6 1047 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 ENOSF1Q7L5Y1 443 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
PRDM5-202ENST00000394435 CYFIP2Q96F07 1278 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 PICK1Q9NRD5 415 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 CYP39A1Q9NYL5 469 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 PHIPQ8WWQ0 1821 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 NFASCO94856 1347 aa17.82■□□□□ 0.44
PRDM5-202ENST00000394435 MEFVO15553 781 aaPredicted RBP17.81■□□□□ 0.44
PRDM5-202ENST00000394435 EXTL3O43909 919 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 SCP2P22307 547 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 FGFR4P22455 802 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 ACOT2P49753 483 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 SNX1Q13596 522 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 MCOLN2Q8IZK6 566 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 CNOT7Q9UIV1 285 aaKnown RBP17.81■□□□□ 0.44
PRDM5-202ENST00000394435 PASKQ96RG2 1323 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 NFKBIEO00221 500 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 ZC3H11AO75152 810 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRDM5-202ENST00000394435 CPP00450 1065 aa17.81■□□□□ 0.44
PRDM5-202ENST00000394435 HLA-DRAP01903 254 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms