RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SATB1Q01826 763 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SPATA2LQ8IUW3 424 aaPredicted RBP15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 NIF3L1Q9GZT8 377 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 MRFAP1Q9Y605 127 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 APOL1O14791 398 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 ACOT2P49753 483 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 PPP2R3CQ969Q6 453 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SENP7Q9BQF6 1050 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SP110Q9HB58 689 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.045e-6■■■■■ 34.5
PPARGC1B-203ENST00000394320 SNX9Q9Y5X1 595 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 MAPK13O15264 365 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 DCTN3O75935 186 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 RGS2P41220 211 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 ACTR2P61160 394 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 PTPAQ15257 358 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 USP49Q70CQ1 688 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SERPINI1Q99574 410 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 SENP1Q9P0U3 644 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 POLIQ9UNA4 740 aa15.28■□□□□ 0.04
PPARGC1B-203ENST00000394320 ZBBXA8MT70 800 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 ITGA4P13612 1032 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 NFIAQ12857 509 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 PARD3BQ8TEW8 1205 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 KLHL29Q96CT2 875 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 ZNF668Q96K58 619 aaPredicted RBP15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 NT5C1AQ9BXI3 368 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 SRGAP2O75044 1071 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 TMEM253P0C7T8 217 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 SNX17Q15036 470 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 Q4G0T1 1027 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 EFCAB12Q6NXP0 572 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 CC2D1AQ6P1N0 951 aaPredicted RBP15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 DCP1BQ8IZD4 617 aaKnown RBP15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 DPF2Q92785 391 aa15.27■□□□□ 0.04
PPARGC1B-203ENST00000394320 RASA4BC9J798 803 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 PLSCR1O15162 318 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 RASA4O43374 803 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 BAG2O95816 211 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 HLA-DRAP01903 254 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 CYP2B6P20813 491 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 FCGRTP55899 365 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 HPS3Q969F9 1004 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 TRIM55Q9BYV6 548 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 DDX47Q9H0S4 455 aaKnown RBP15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 PPCSQ9HAB8 311 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 GALCP54803 685 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 GPS1Q13098 491 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 RCN2Q14257 317 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 MYBPC2Q14324 1141 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 PLA2G4FQ68DD2 849 aa15.27■□□□□ 0.03
PPARGC1B-203ENST00000394320 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 ZNF211Q13398 564 aaPredicted RBP15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 NUDT18Q6ZVK8 323 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 SPATA4Q8NEY3 305 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 HOXC6P09630 235 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 GTF2H1P32780 548 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 NOP14P78316 857 aaKnown RBP15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 CXCL9Q07325 125 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 LAMB3Q13751 1172 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 TRIM67Q6ZTA4 783 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 TTC8Q8TAM2 541 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 ACER1Q8TDN7 264 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 FBXO41Q8TF61 875 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 TMEM106CQ9BVX2 250 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 IDI2Q9BXS1 227 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 TCRBV5S4A2TA0A5A2 114 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 HSPA4LO95757 839 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 ANKS1AQ92625 1134 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 MRIQ9BWK5 157 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 KIAA1683Q9H0B3 1180 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 TJP2Q9UDY2 1190 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 TBX20Q9UMR3 447 aa15.26■□□□□ 0.03
PPARGC1B-203ENST00000394320 ZC3H11AO75152 810 aaKnown RBP eCLIP15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 CYP2C8P10632 490 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 OAZ1P54368 228 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 SNCBQ16143 134 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 PCNX4Q63HM2 1172 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 DNERQ8NFT8 737 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 PLEKHA5Q9HAU0 1116 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 ATP5HO75947 161 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 PDGFRAP16234 1089 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 NAMPTP43490 491 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 ANKRD20A4Q4UJ75 823 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 ANKRD20A8PQ5CZ79 823 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 ANKRD20A2Q5SQ80 823 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 ANKRD20A1Q5TYW2 823 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 IZUMO3Q5VZ72 239 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 LMBRD2Q68DH5 695 aaPredicted RBP15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 C4orf22Q6V702 233 aa15.25■□□□□ 0.03
PPARGC1B-203ENST00000394320 KRT35Q92764 455 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms