RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 NUMBLQ9Y6R0 609 aa12.21□□□□□ -0.45
VTI1BP2-201ENST00000394154 CNOT1A5YKK6 2376 aaKnown RBP12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 PP2D1A8MPX8 630 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 C1QTNF9BB2RNN3 333 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 IPO5O00410 1097 aaKnown RBP12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 INPPL1O15357 1258 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 GAS7O60861 476 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 CNPP09543 421 aaKnown RBP12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 C1QTNF9P0C862 333 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 ITGB5P18084 799 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 NRLP54845 237 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 KARSQ15046 597 aaKnown RBP12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 LPAL2Q16609 132 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 KIZQ2M2Z5 673 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 ZBTB41Q5SVQ8 909 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 PLPPR4Q7Z2D5 763 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 GJA10Q969M2 543 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 CLDN23Q96B33 292 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 TEKT3Q9BXF9 490 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 JPH1Q9HDC5 661 aaPredicted RBP12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 LTB4R2Q9NPC1 389 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 KCNH7Q9NS40 1196 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 MTF2Q9Y483 593 aaPredicted RBP12.2□□□□□ -0.46
VTI1BP2-201ENST00000394154 A0A087X0B3 334 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 TMEM8BA6NDV4 472 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 NCAM2O15394 837 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 GDF9O60383 454 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 PSMD10O75832 226 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 SMC2O95347 1197 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 RPS9P46781 194 aaKnown RBP12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 SLC26A2P50443 739 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 STAT5BP51692 787 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 LIMK1P53667 647 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 GPC5P78333 572 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 MTMR1Q13613 665 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 POSTNQ15063 836 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 E2F4Q16254 413 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 HAUS3Q68CZ6 603 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 NCAPH2Q6IBW4 605 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 GET4Q7L5D6 327 aaPredicted RBP12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 SMG7Q92540 1137 aaKnown RBP12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 PPP1R16BQ96T49 567 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 NT5C3AQ9H0P0 336 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 AGO4Q9HCK5 861 aaKnown RBP12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 TBC1D22BQ9NU19 505 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 SLC9A2Q9UBY0 812 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 STK17AQ9UEE5 414 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 TCEAL9Q9UHQ7 104 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 ZFP37Q9Y6Q3 630 aaPredicted RBP12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 RALGAPA1Q6GYQ0 2036 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 COL4A3Q01955 1670 aa12.19□□□□□ -0.46
VTI1BP2-201ENST00000394154 COL1A2P08123 1366 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 EVPLQ92817 2033 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 A0A0U1RQF3 1178 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 HBP1O60381 514 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 GPR32O75388 356 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PLCG1P19174 1290 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 AMPD3Q01432 767 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PFKPQ01813 784 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 TYRO3Q06418 890 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PPP2R5CQ13362 524 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PPP2R5DQ14738 602 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 SLC44A4Q53GD3 710 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PRR23BQ6ZRT6 265 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 ZNF598Q86UK7 904 aaKnown RBP12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 BCL7CQ8WUZ0 217 aaPredicted RBP12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PAGE5Q96GU1 130 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 NELL2Q99435 816 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PLIN2Q99541 437 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 MRPL17Q9NRX2 175 aaKnown RBP12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 PKD2L1Q9P0L9 805 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
VTI1BP2-201ENST00000394154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 LILRB3O75022 631 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 PAPLNO95428 1278 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 MYL1P05976 194 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 ADH1AP07327 375 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 GALTP07902 379 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 AFMP43652 599 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 SPIRE1Q08AE8 756 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 PNOCQ13519 176 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 EPHA7Q15375 998 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 HYIQ5T013 277 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 PDXDC2PQ6P474 469 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 KCTD17Q8N5Z5 321 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 SMARCE1Q969G3 411 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 POLR3CQ9BUI4 534 aaPredicted RBP12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 VN1R3Q9BXE9 311 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 LRRC27Q9C0I9 530 aa12.17□□□□□ -0.46
VTI1BP2-201ENST00000394154 PIDD1Q9HB75 910 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms