RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ARHGEF1Q92888 912 aaKnown RBP15.51■□□□□ 0.07
SFXN3-202ENST00000393459 TTC1Q99614 292 aa15.51■□□□□ 0.07
SFXN3-202ENST00000393459 ANAPC7Q9UJX3 599 aa15.51■□□□□ 0.07
SFXN3-202ENST00000393459 CORO1CQ9ULV4 474 aaPredicted RBP15.51■□□□□ 0.07
SFXN3-202ENST00000393459 FRMD4BQ9Y2L6 1034 aa15.51■□□□□ 0.07
SFXN3-202ENST00000393459 KITP10721 976 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 KRT10P13645 584 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 KPNB1Q14974 876 aaKnown RBP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 NEDD1Q8NHV4 660 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 LRRC8CQ8TDW0 803 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 CKAP2Q8WWK9 683 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 CPA5Q8WXQ8 436 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 SHCBP1LQ9BZQ2 653 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 GRID1Q9ULK0 1009 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 WASF2Q9Y6W5 498 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 ABCB11O95342 1321 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 CAPN9O14815 690 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 STK10O94804 968 aaKnown RBP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 UFL1O94874 794 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 CFBP00751 764 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 BMP3P12645 472 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 ATF7P17544 494 aaPredicted RBP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 CALB2P22676 271 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 PSMC2P35998 433 aaKnown RBP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 GTF2IP78347 998 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 DHX34Q14147 1143 aaKnown RBP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 EFTUD2Q15029 972 aaKnown RBP eCLIP15.5■□□□□ 0.073e-8■■□□□ 12.4
SFXN3-202ENST00000393459 ATP13A4Q4VNC1 1196 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 TRAPPC3LQ5T215 181 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 STMN4Q9H169 189 aaPredicted RBP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 NMRK1Q9NWW6 199 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 NINJ2Q9NZG7 142 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 MARCOQ9UEW3 520 aaPredicted RBP15.5■□□□□ 0.07
SFXN3-202ENST00000393459 PCDHAC2Q9Y5I4 1007 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 CCDC88AQ3V6T2 1871 aa15.5■□□□□ 0.07
SFXN3-202ENST00000393459 ATP9AO75110 1047 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 GDF11O95390 407 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 ATF2P15336 505 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 PEX5P50542 639 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 RAB27AP51159 221 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 JAM2P57087 298 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 ARHGAP4P98171 946 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 KLC1Q07866 573 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 RIPK1Q13546 671 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 SLMAPQ14BN4 828 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 GALNTL6Q49A17 601 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 HS2ST1Q7LGA3 356 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 TTC7BQ86TV6 843 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 CLPTM1LQ96KA5 538 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 TOPORSQ9NS56 1045 aaPredicted RBP15.49■□□□□ 0.07
SFXN3-202ENST00000393459 MTMR4Q9NYA4 1195 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 FAM187AA6NFU0 413 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 USP1O94782 785 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 SPATA31C1P0DKV0 1188 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 PECAM1P16284 738 aaPredicted RBP15.49■□□□□ 0.07
SFXN3-202ENST00000393459 DYNLT1P63172 113 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 HHATQ5VTY9 493 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 ZNF365Q70YC5 407 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 STK32AQ8WU08 396 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 TYW1Q9NV66 732 aaKnown RBP15.49■□□□□ 0.07
SFXN3-202ENST00000393459 APEX2Q9UBZ4 518 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 LY75O60449 1722 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 SRRM3A6NNA2 597 aaPredicted RBP15.49■□□□□ 0.07
SFXN3-202ENST00000393459 FGFR1P11362 822 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 KCNA3P22001 575 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 SLC1A5Q15758 541 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 VPS52Q8N1B4 723 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 MCUR1Q96AQ8 359 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 CBWD1Q9BRT8 395 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 KIFC3Q9BVG8 833 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 STK33Q9BYT3 514 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 OCEL1Q9H607 264 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 ZFP69BQ9UJL9 534 aa15.49■□□□□ 0.07
SFXN3-202ENST00000393459 SYNGAP1Q96PV0 1343 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 PRKCIP41743 596 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 NOP9Q86U38 636 aaKnown RBP15.48■□□□□ 0.07
SFXN3-202ENST00000393459 SEC14L1Q92503 715 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 LZTS2Q9BRK4 669 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 GPR88Q9GZN0 384 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 SAE1Q9UBE0 346 aaPredicted RBP15.48■□□□□ 0.07
SFXN3-202ENST00000393459 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 CACNA1SQ13698 1873 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 PNMA6FA0A0J9YX94 578 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 NEK3P51956 506 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 GPC5P78333 572 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 GAD2Q05329 585 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 PPP3CAQ08209 521 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 LAMB3Q13751 1172 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 EDRF1Q3B7T1 1238 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 SNX30Q5VWJ9 437 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 ARHGEF18Q6ZSZ5 1173 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 SCG3Q8WXD2 468 aaKnown RBP15.48■□□□□ 0.07
SFXN3-202ENST00000393459 ANKRD2Q9GZV1 360 aa15.48■□□□□ 0.07
SFXN3-202ENST00000393459 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
SFXN3-202ENST00000393459 PODXLO00592 558 aa15.47■□□□□ 0.07
SFXN3-202ENST00000393459 TTC4O95801 387 aa15.47■□□□□ 0.07
SFXN3-202ENST00000393459 PLS3P13797 630 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms