RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 RWDD2BP57060 319 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 SEMA3FQ13275 785 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 SGSM1Q2NKQ1 1148 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 CBWD1Q9BRT8 395 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 PITPNM2Q9BZ72 1349 aa17.44■□□□□ 0.38
PHTF1-205ENST00000393357 NVLO15381 856 aaKnown RBP17.43■□□□□ 0.38
PHTF1-205ENST00000393357 LDHCP07864 332 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 KITP10721 976 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 ALDH3A1P30838 453 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 DYNLT1P63172 113 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 DDB1Q16531 1140 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 ATP13A4Q4VNC1 1196 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 SNX30Q5VWJ9 437 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 C16orf86Q6ZW13 317 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 NOP9Q86U38 636 aaKnown RBP17.43■□□□□ 0.38
PHTF1-205ENST00000393357 GLIS1Q8NBF1 620 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 ART4Q93070 314 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 RBM15Q96T37 977 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHTF1-205ENST00000393357 CYP39A1Q9NYL5 469 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 TRAF3IP3Q9Y228 551 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 BTNL10A8MVZ5 291 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 ZBTB5O15062 677 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 MAPK13O15264 365 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 SORBS3O60504 671 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 RAB27AP51159 221 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 CDR2Q01850 454 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 ZNF543Q08ER8 600 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 IZUMO3Q5VZ72 239 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 RINT1Q6NUQ1 792 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 RTFDC1Q9BY42 306 aaPredicted RBP17.43■□□□□ 0.38
PHTF1-205ENST00000393357 TOPORSQ9NS56 1045 aaPredicted RBP17.43■□□□□ 0.38
PHTF1-205ENST00000393357 COL18A1P39060 1754 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 K7ENM7 598 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 GNPATO15228 680 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 TTLL1O95922 423 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 PPP3CAQ08209 521 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 SLC1A5Q15758 541 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 P3H1Q32P28 736 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 SCG3Q8WXD2 468 aaKnown RBP17.43■□□□□ 0.38
PHTF1-205ENST00000393357 GPR88Q9GZN0 384 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 MARCOQ9UEW3 520 aaPredicted RBP17.43■□□□□ 0.38
PHTF1-205ENST00000393357 GRID1Q9ULK0 1009 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 WASF2Q9Y6W5 498 aa17.43■□□□□ 0.38
PHTF1-205ENST00000393357 RALAP11233 206 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 MAPK4P31152 587 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 SEPT2Q15019 361 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 EFTUD2Q15029 972 aaKnown RBP eCLIP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 MTFR1Q15390 333 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 ASRGL1Q7L266 308 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 PDCD7Q8N8D1 485 aaKnown RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 TMEM117Q9H0C3 514 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 A0A0A6YYK5 440 aaPredicted RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 FAM47DPA6NHR8 397 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 KIF3CO14782 793 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 BCRP11274 1271 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 RASSF2P50749 326 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 POLGP54098 1239 aaPredicted RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 MARSP56192 900 aaKnown RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 LAMB3Q13751 1172 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 CFAP157Q5JU67 520 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 LVRNQ6Q4G3 990 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 STMN2Q93045 179 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 CNOT7Q9UIV1 285 aaKnown RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 NUMBLQ9Y6R0 609 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 SP100P23497 879 aaPredicted RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 TTC7BQ86TV6 843 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 ZBED8Q8IZ13 594 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 SYT2Q8N9I0 419 aaPredicted RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 CLPTM1LQ96KA5 538 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 CCDC77Q9BR77 488 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 KIFC3Q9BVG8 833 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 SHCBP1LQ9BZQ2 653 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 DDX4Q9NQI0 724 aaKnown RBP17.42■□□□□ 0.38
PHTF1-205ENST00000393357 ZNF148Q9UQR1 794 aa17.42■□□□□ 0.38
PHTF1-205ENST00000393357 OAS1P00973 400 aaKnown RBP17.41■□□□□ 0.38
PHTF1-205ENST00000393357 ALADP13716 330 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 CETN2P41208 172 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 GSTO1P78417 241 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 NLRP9Q7RTR0 991 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 CCDC125Q86Z20 511 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 RHOT2Q8IXI1 618 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 RFWD2Q8NHY2 731 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 FGD4Q96M96 766 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 ANKRD2Q9GZV1 360 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 AGPAT3Q9NRZ7 376 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
PHTF1-205ENST00000393357 PCDHAC2Q9Y5I4 1007 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 SMAPO00193 183 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 MSH4O15457 936 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 GYG2O15488 501 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 USP1O94782 785 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 STK10O94804 968 aaKnown RBP17.41■□□□□ 0.38
PHTF1-205ENST00000393357 GAS8O95995 478 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 ADRA1DP25100 572 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 ATP5DP30049 168 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
PHTF1-205ENST00000393357 THOC5Q13769 683 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms