RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 KRT8P05787 483 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 APRTP07741 180 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 NNMTP40261 264 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 CRKP46108 304 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 CUL4AQ13619 759 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 SNX31Q8N9S9 440 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 PLEKHF1Q96S99 279 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 CACNA2D2Q9NY47 1150 aa16.37■□□□□ 0.21
ALK-201ENST00000389048 AVPR1AP37288 418 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 URGCPQ8TCY9 931 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 SPATA33Q96N06 139 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 TMEM47Q9BQJ4 181 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 LXNQ9BS40 222 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 RBAKQ9NYW8 714 aaPredicted RBP16.36■□□□□ 0.21
ALK-201ENST00000389048 ETFBP38117 255 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 STX19Q8N4C7 294 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 PKD2L2Q9NZM6 624 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 XPO7Q9UIA9 1087 aaKnown RBP16.36■□□□□ 0.21
ALK-201ENST00000389048 KIF28PB7ZC32 967 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 ZBTB5O15062 677 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 NMT1P30419 496 aaKnown RBP16.36■□□□□ 0.21
ALK-201ENST00000389048 HLFQ16534 295 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 BTBD8Q5XKL5 378 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 HEATR4Q86WZ0 1026 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 ZBTB39O15060 712 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 ADGRF4Q8IZF3 695 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 ARHGAP18Q8N392 663 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 DPF2Q92785 391 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 KDM4CQ9H3R0 1056 aa16.36■□□□□ 0.21
ALK-201ENST00000389048 MIF4GDA9UHW6 222 aaKnown RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 TBC1D4O60343 1298 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 WRNIP1Q96S55 665 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 APOL5Q9BWW9 433 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 TSSK1BQ9BXA7 367 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 TASP1Q9H6P5 420 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 ZFATQ9P243 1243 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 FAM160B2Q86V87 743 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 EME1Q96AY2 570 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 hCG_1984214I3L0E3 225 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 LZTS3O60299 673 aaPredicted RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 ATP6V1B1P15313 513 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 ALCAMQ13740 583 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 ZNF713Q8N859 430 aaPredicted RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 NECTIN1Q15223 517 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 CDKL3Q8IVW4 592 aaPredicted RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 NLGN1Q8N2Q7 840 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.35■□□□□ 0.21
ALK-201ENST00000389048 BHMTQ93088 406 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 RNPC3Q96LT9 517 aaKnown RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 DHX36Q9H2U1 1008 aaKnown RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
ALK-201ENST00000389048 ARHGEF37A1IGU5 675 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 SMNDC1O75940 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
ALK-201ENST00000389048 PDGFRBP09619 1106 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 AKT1P31749 480 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 KLK7P49862 253 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 CAV1Q03135 178 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 TNFAIP2Q03169 654 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 SMTNL2Q2TAL5 461 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 RHOT1Q8IXI2 618 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 EFHBQ8N7U6 833 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 OSBPL10Q9BXB5 764 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 PLEKHA5Q9HAU0 1116 aa16.35■□□□□ 0.21
ALK-201ENST00000389048 ZC3H4Q9UPT8 1303 aaKnown RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 KRT75O95678 551 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 TPI1P60174 286 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 PFKFB3Q16875 520 aaPredicted RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 SIRT2Q8IXJ6 389 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 DCUN1D1Q96GG9 259 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 TBX22Q9Y458 520 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 C9orf72Q96LT7 481 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 AGBL1Q96MI9 1066 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 EIF2AK1Q9BQI3 630 aaKnown RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 TMEM117Q9H0C3 514 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 WNT8AQ9H1J5 351 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 CD274Q9NZQ7 290 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 C6orf203Q9P0P8 240 aaPredicted RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 ASAP2O43150 1006 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 CCDC22O60826 627 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 CAND2O75155 1236 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 S100A5P33763 92 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 RFX3P48380 749 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 NME5P56597 212 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 DYRK4Q9NR20 520 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 SELENONQ9NZV5 590 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 DYTNA2CJ06 578 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 NR1H3Q13133 447 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 INPP5AQ14642 412 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 ARL6IP4Q66PJ3 421 aaKnown RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 SLC35G2Q8TBE7 412 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 MCEEQ96PE7 176 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 TOPORSQ9NS56 1045 aaPredicted RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 PARVAQ9NVD7 372 aa16.34■□□□□ 0.21
ALK-201ENST00000389048 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.34■□□□□ 0.21
ALK-201ENST00000389048 EPB42P16452 691 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms