RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 RECQL4O94761 1208 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 HK1P19367 917 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PCSK1P29120 753 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 MCM7P33993 719 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PTGS2P35354 604 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 FXR1P51114 621 aaKnown RBP eCLIP3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 EVA1CP58658 441 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 CTXN1P60606 82 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 CCT2P78371 535 aaKnown RBP3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 ITKQ08881 620 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 ODF1Q14990 250 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 NOMO1Q15155 1222 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 RRP12Q5JTH9 1297 aaKnown RBP3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 AGAP9Q5VTM2 703 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 AFMIDQ63HM1 303 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PGM2L1Q6PCE3 622 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PCSK4Q6UW60 755 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 LRRC55Q6ZSA7 311 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PLXDC1Q8IUK5 500 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 DRC7Q8IY82 874 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PRR18Q8N4B5 295 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC16A11Q8NCK7 471 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZNF483Q8TF39 744 aaPredicted RBP3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 STAG1Q8WVM7 1258 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 MRGPRX4Q96LA9 322 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 SORCS2Q96PQ0 1159 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC2A13Q96QE2 648 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PRRX2Q99811 253 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC23A1Q9UHI7 598 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 HDAC5Q9UQL6 1122 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 NPIPB8E9PQR5 432 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 GPR32O75388 356 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 MT-CO1P00395 513 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLPIP03973 132 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ITGB1P05556 798 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 MYBL2P10244 700 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 MAKP20794 623 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 PTPN7P35236 360 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 GDF5P43026 501 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 PTTG1IPP53801 180 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC16A1P53985 500 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 CDC42EP1Q00587 391 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ABHD18Q0P651 414 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ABCB5Q2M3G0 1257 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 BEAN1Q3B7T3 259 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ATXN7L2Q5T6C5 722 aaPredicted RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ARMC6Q6NXE6 501 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 EFCAB12Q6NXP0 572 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 GDF7Q7Z4P5 450 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ARHGEF19Q8IW93 802 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZFPM1Q8IX07 1006 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 RHOT2Q8IXI1 618 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 CMTR2Q8IYT2 770 aaKnown RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZNF276Q8N554 614 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZGPATQ8N5A5 531 aaKnown RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 OR10H5Q8NGA6 315 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 IFI44Q8TCB0 444 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 NSUN6Q8TEA1 469 aaKnown RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC25A43Q8WUT9 341 aaPredicted RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 LARP4BQ92615 738 aaKnown RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 TFAP2CQ92754 450 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 HAS1Q92839 578 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 CAMKK2Q96RR4 588 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 NEU1Q99519 415 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 MRI1Q9BV20 369 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 SCAND2PQ9GZW5 306 aaPredicted RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 TMEM74BQ9NUR3 256 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 TMEM140Q9NV12 185 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 CALCOCO1Q9P1Z2 691 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZBTB21Q9ULJ3 1066 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 LIMCH1Q9UPQ0 1083 aa3.12□□□□□ -1.91
RNU6-541P-201ENST00000384709 RNASET2O00584 256 aaKnown RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZNF202O95125 648 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 CFIP05156 583 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 KRT4P19013 534 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 DDCP20711 480 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 FPR1P21462 350 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 IBSPP21815 317 aaPredicted RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 GCSHP23434 173 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 APOBEC3AP31941 199 aaPredicted RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 RECQLP46063 649 aaPredicted RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 ALDH1A3P47895 512 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 PER3P56645 1201 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 DSC2Q02487 901 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 NHLH2Q02577 135 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 TAP1Q03518 808 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 DPTQ07507 201 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 TARDBPQ13148 414 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 FAM50AQ14320 339 aaKnown RBP3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 UBXN2BQ14CS0 331 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 PPP4R3AQ6IN85 833 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 USP51Q70EK9 711 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 CPA6Q8N4T0 437 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 DCBLD1Q8N8Z6 715 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 IL17RDQ8NFM7 739 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 HDAC10Q969S8 669 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 CHMP4CQ96CF2 233 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 MTMR8Q96EF0 704 aa3.11□□□□□ -1.91
RNU6-541P-201ENST00000384709 UHRF1Q96T88 793 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms