RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CDCA5Q96FF9 252 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ANKRD27Q96NW4 1050 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 IWS1Q96ST2 819 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 TIPINQ9BVW5 301 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 DPH5Q9H2P9 285 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 EPB41L4BQ9H329 900 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ELP3Q9H9T3 547 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 ANKEF1Q9NU02 776 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 LARSQ9P2J5 1176 aaKnown RBP9.59□□□□□ -0.87
GPNMB-202ENST00000381990 FBXO40Q9UH90 709 aa9.59□□□□□ -0.87
GPNMB-202ENST00000381990 NFASCO94856 1347 aa9.59□□□□□ -0.88
GPNMB-202ENST00000381990 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 PODXLO00592 558 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 BACH1O14867 736 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 IRF6O14896 467 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 RGS20O76081 388 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 TMEM253P0C7T8 217 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 MAPTP10636 758 aaKnown RBP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 KCNA2P16389 499 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 EPHX2P34913 555 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 ALCAMQ13740 583 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 NAA25Q14CX7 972 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 UGCGQ16739 394 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 GNPTABQ3T906 1256 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 DNERQ8NFT8 737 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 OTUD5Q96G74 571 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 STRA6Q9BX79 667 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 CELF4Q9BZC1 486 aaKnown RBP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 ADAM7Q9H2U9 754 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 MTRF1LQ9UGC7 380 aaKnown RBP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 PCDHA10Q9Y5I2 948 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 LCTP09848 1927 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 WDR81Q562E7 1941 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 PFASO15067 1338 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 DKC1O60832 514 aaKnown RBP eCLIP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 AKAP3O75969 853 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 CLTAP09496 248 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 SLC9A1P19634 815 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 CCND1P24385 295 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 MFSD5Q6N075 450 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 NSMCE1Q8WV22 266 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 TCP11Q8WWU5 503 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 TBC1D31Q96DN5 1066 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 RUNDC3BQ96NL0 473 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 SELENOSQ9BQE4 189 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 MKNK1Q9BUB5 465 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 SYNGAP1Q96PV0 1343 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 SPATA31C2B4DYI2 1134 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 O00370 1275 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 LIN7AO14910 233 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 CLIC2O15247 247 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 NEBLO76041 1014 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 ANP32DO95626 131 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 ACTN1P12814 892 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 CHRNA3P32297 505 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 TNFAIP8L3Q5GJ75 292 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 PNMA8AQ86V59 439 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 LRRC34Q8IZ02 419 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 ANKRD35Q8N283 1001 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 IFT74Q96LB3 600 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 ROPN1BQ9BZX4 212 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 ROPN1Q9HAT0 212 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-202ENST00000381990 HOMER3Q9NSC5 361 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 BTBD7Q9P203 1132 aa9.58□□□□□ -0.88
GPNMB-202ENST00000381990 DDX3XO00571 662 aaKnown RBP eCLIP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 SNX3O60493 162 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 PLS3P13797 630 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 NQO1P15559 274 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 PAX7P23759 505 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 PSMC2P35998 433 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 STAT1P42224 750 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 CASP4P49662 377 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 MYO1EQ12965 1108 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 XKR9Q5GH70 373 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 CEP120Q8N960 986 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 SLC30A5Q8TAD4 765 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 CTNNBL1Q8WYA6 563 aaPredicted RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 ATP6V0A1Q93050 837 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 TRIM51Q9BSJ1 452 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 JPH1Q9HDC5 661 aaPredicted RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 KCNH4Q9UQ05 1017 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 MIF4GDA9UHW6 222 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 K7ENM7 598 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 KIAA0391O15091 583 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 DDX3YO15523 660 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 SUN1O94901 812 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 GGPS1O95749 300 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 OAS1P00973 400 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 SHBGP04278 402 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 PSAPP07602 524 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 VIMP08670 466 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 RPSAP08865 295 aaKnown RBP9.57□□□□□ -0.88
GPNMB-202ENST00000381990 ATP5DP30049 168 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 GALCP54803 685 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 PPIL2Q13356 520 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 MYBPC2Q14324 1141 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 STXBP2Q15833 593 aa9.57□□□□□ -0.88
GPNMB-202ENST00000381990 MAEAQ7L5Y9 396 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms