RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PSME4Q14997 1843 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 KRT19P08727 400 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 FERP16591 822 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 GLRA2P23416 452 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 OAS2P29728 719 aaKnown RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 GJA5P36382 358 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 TNFSF9P41273 254 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 PLA2G4AP47712 749 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 INHBEP58166 350 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 GUCY2DQ02846 1103 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 CKAP4Q07065 602 aaKnown RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 ORC1Q13415 861 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 SMC1AQ14683 1233 aaKnown RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 FXNQ16595 210 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 C8orf74Q6P047 294 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 ARMC9Q7Z3E5 817 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 CHST13Q8NET6 341 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 CENPHQ9H3R5 247 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 MCM3APO60318 1980 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 FARP2O94887 1054 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 C1orf220Q5T0J3 134 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 C10orf67Q8IYJ2 551 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 MCPH1Q8NEM0 835 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 IP6K2Q9UHH9 426 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 AGO2Q9UKV8 859 aaKnown RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 ADAMTS5Q9UNA0 930 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 SYNGAP1Q96PV0 1343 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 SLC26A4O43511 780 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 EDN1P05305 212 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 TGFB3P10600 412 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 PIK3CAP42336 1068 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 TFAMQ00059 246 aaKnown RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 DPY19L2P1Q6NXN4 242 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 CPA5Q8WXQ8 436 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 GINM1Q9NU53 330 aa11.6□□□□□ -0.55
NEDD9-201ENST00000379433 MYH9P35579 1960 aaKnown RBP11.6□□□□□ -0.55
NEDD9-201ENST00000379433 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 BUB1BO60566 1050 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 NEBLO76041 1014 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 MAPTP10636 758 aaKnown RBP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 OAZ1P54368 228 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 KRT39Q6A163 491 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 DPP9Q86TI2 863 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 DDX42Q86XP3 938 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 ZC3H3Q8IXZ2 948 aaKnown RBP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 LENG1Q96BZ8 264 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 KREMEN1Q96MU8 473 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 PCYT2Q99447 389 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 EDEM3Q9BZQ6 932 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 TMEM165Q9HC07 324 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 VPS18Q9P253 973 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 IVNS1ABPQ9Y6Y0 642 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 CCL15-CCL14A0A0B4J2E2 113 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 B4GALT5O43286 388 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 FGFR4P22455 802 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 POU5F1Q01860 360 aaKnown RBP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 PPATQ06203 517 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 CCL15Q16663 113 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 GPD1LQ8N335 351 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 SEPT1Q8WYJ6 367 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 MKNK1Q9BUB5 465 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 RAB20Q9NX57 234 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 RGPD3A6NKT7 1758 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-201ENST00000379433 RGPD4Q7Z3J3 1758 aa11.59□□□□□ -0.55
NEDD9-201ENST00000379433 CLDN3O15551 220 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 GJB6O95452 261 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 ITGA4P13612 1032 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 TCP1P17987 556 aaKnown RBP11.58□□□□□ -0.55
NEDD9-201ENST00000379433 NCKAP1LP55160 1127 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 LONRF1Q17RB8 773 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 ZCCHC8Q6NZY4 707 aaKnown RBP11.58□□□□□ -0.55
NEDD9-201ENST00000379433 NOP9Q86U38 636 aaKnown RBP11.58□□□□□ -0.55
NEDD9-201ENST00000379433 MAP4K3Q8IVH8 894 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 FBXL13Q8NEE6 735 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 NT5C1BQ96P26 610 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 CEP89Q96ST8 783 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 FUT8Q9BYC5 575 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 GPR88Q9GZN0 384 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 NRBP2Q9NSY0 501 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 NXF1Q9UBU9 619 aaKnown RBP11.58□□□□□ -0.55
NEDD9-201ENST00000379433 AGTPBP1Q9UPW5 1226 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 PPP2R3BQ9Y5P8 575 aa11.58□□□□□ -0.55
NEDD9-201ENST00000379433 PTPRJQ12913 1337 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 A0A0G2JLL6 359 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 CCDC151A5D8V7 595 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 PDHXO00330 501 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 ADCYAP1R1P41586 468 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 JAM2P57087 298 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms