RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SPTLC3Q9NUV7 552 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 MROH5Q6ZUA9 1318 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 CHURC1-FNTBB4DL54 471 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 GPC1P35052 558 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 MXI1P50539 228 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 SEPT2Q15019 361 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 DGKKQ5KSL6 1271 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 PGBD2Q6P3X8 592 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 PRKD2Q9BZL6 878 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 RBM7Q9Y580 266 aaKnown RBP13.97□□□□□ -0.17
HIPK3-202ENST00000379016 ZNF790Q6PG37 636 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 SRLQ86TD4 932 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 BEST2Q8NFU1 509 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 GLMNQ92990 594 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 EME1Q96AY2 570 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 RNFT2Q96EX2 444 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 TGS1Q96RS0 853 aaKnown RBP13.97□□□□□ -0.17
HIPK3-202ENST00000379016 SERHL2Q9H4I8 314 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 SERHLQ9NQF3 203 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 PRIM2P49643 509 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 RHAGQ02094 409 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 CTTNQ14247 550 aaKnown RBP13.97□□□□□ -0.17
HIPK3-202ENST00000379016 NCF4Q15080 339 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 PPP2R5BQ15173 497 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 NDUFA5Q16718 116 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 MAP3K5Q99683 1374 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
HIPK3-202ENST00000379016 POU1F1P28069 291 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 HOXC9P31274 260 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 BCAP31P51572 246 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 ARFIP2P53365 341 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
HIPK3-202ENST00000379016 TYW3Q6IPR3 259 aaKnown RBP13.96□□□□□ -0.17
HIPK3-202ENST00000379016 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.96□□□□□ -0.17
HIPK3-202ENST00000379016 NACC2Q96BF6 587 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 SENP2Q9HC62 589 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
HIPK3-202ENST00000379016 KIF2CQ99661 725 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 SEPT3Q9UH03 358 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 RBMXL2O75526 392 aaKnown RBP13.96□□□□□ -0.17
HIPK3-202ENST00000379016 HIC1Q14526 733 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 LRRC14Q15048 493 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 ARMC4Q5T2S8 1044 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 SH3TC2Q8TF17 1288 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 COA7Q96BR5 231 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 MRPL1Q9BYD6 325 aaKnown RBP13.96□□□□□ -0.17
HIPK3-202ENST00000379016 RHBDL2Q9NX52 303 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 SMIM31A0A1B0GVY4 71 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 TNFAIP2Q03169 654 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 SCRN3Q0VDG4 424 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 CSTF3Q12996 717 aaKnown RBP13.96□□□□□ -0.17
HIPK3-202ENST00000379016 PLCL1Q15111 1095 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 PPP1R2P3Q6NXS1 205 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 KIAA0408Q6ZU52 694 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 TOGARAM2Q6ZUX3 1019 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 FHOD1Q9Y613 1164 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 PDZK1P1A8MUH7 402 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 DGKIO75912 1065 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 ATP5HO75947 161 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 PDHA2P29803 388 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 ROR1Q01973 937 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 TAF5Q15542 800 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 BLOC1S6Q9UL45 172 aa13.96□□□□□ -0.17
HIPK3-202ENST00000379016 M0QYV0 167 aa13.96□□□□□ -0.18
HIPK3-202ENST00000379016 STRNO43815 780 aa13.96□□□□□ -0.18
HIPK3-202ENST00000379016 IREB2P48200 963 aaKnown RBP13.96□□□□□ -0.18
HIPK3-202ENST00000379016 CYLC2Q14093 348 aaPredicted RBP13.96□□□□□ -0.18
HIPK3-202ENST00000379016 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.18
HIPK3-202ENST00000379016 GOLPH3LQ9H4A5 285 aa13.96□□□□□ -0.18
HIPK3-202ENST00000379016 KLHL1Q9NR64 748 aa13.96□□□□□ -0.18
HIPK3-202ENST00000379016 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.18
HIPK3-202ENST00000379016 PRODHO43272 600 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 TNNI3P19429 210 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 NOS3P29474 1203 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 CDC27P30260 824 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 R3HCC1LQ7Z5L2 792 aaKnown RBP13.95□□□□□ -0.18
HIPK3-202ENST00000379016 STAMBPL1Q96FJ0 436 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 DDX56Q9NY93 547 aaKnown RBP13.95□□□□□ -0.18
HIPK3-202ENST00000379016 CYP39A1Q9NYL5 469 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 AREL1O15033 823 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 CLDN3O15551 220 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 LAYNQ6UX15 382 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 USP33Q8TEY7 942 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 RNF25Q96BH1 459 aaPredicted RBP13.95□□□□□ -0.18
HIPK3-202ENST00000379016 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
HIPK3-202ENST00000379016 ADAM22Q9P0K1 906 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 VTI1BQ9UEU0 232 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 SH3BP1Q9Y3L3 701 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 TNRQ92752 1358 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 GPC3P51654 580 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 NDUFA8P51970 172 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 EPHX4Q8IUS5 362 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 AMNQ9BXJ7 453 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 COPS7BQ9H9Q2 264 aaPredicted RBP13.95□□□□□ -0.18
HIPK3-202ENST00000379016 EVPLLA8MZ36 301 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 FGGP02679 453 aa13.95□□□□□ -0.18
HIPK3-202ENST00000379016 SERPING1P05155 500 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms