RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 RGS2P41220 211 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 ST13P50502 369 aaKnown RBP12.5□□□□□ -0.41
NPHS1-202ENST00000378910 ALDH5A1P51649 535 aaPredicted RBP12.5□□□□□ -0.41
NPHS1-202ENST00000378910 TRIM28Q13263 835 aaKnown RBP12.5□□□□□ -0.41
NPHS1-202ENST00000378910 ARHGEF6Q15052 776 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 TRIM16LQ309B1 348 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 WDR45BQ5MNZ6 344 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 TTI2Q6NXR4 508 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 CROCCP3Q8IVE0 287 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 SYT2Q8N9I0 419 aaPredicted RBP12.5□□□□□ -0.41
NPHS1-202ENST00000378910 TSEN2Q8NCE0 465 aaKnown RBP12.5□□□□□ -0.41
NPHS1-202ENST00000378910 CAAP1Q9H8G2 361 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 GGA1Q9UJY5 639 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 TMCC3Q9ULS5 477 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 DOLKQ9UPQ8 538 aa12.5□□□□□ -0.41
NPHS1-202ENST00000378910 A0A0G2JND7 137 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 FAM237AA0A1B0GTK4 181 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 SLC16A2P36021 539 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 CCNFP41002 786 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 CSE1LP55060 971 aaKnown RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 MFAP3P55082 362 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 NR1D2Q14995 579 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 PDCD4Q53EL6 469 aaKnown RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 SNX32Q86XE0 403 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 DTX3LQ8TDB6 740 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 C1orf112Q9NSG2 853 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 ANGPTL3Q9Y5C1 460 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 INHBAP08476 426 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 ITGA2BP08514 1039 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 DLATP10515 647 aaKnown RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 USP11P51784 963 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 SFR1Q86XK3 245 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 PIGOQ8TEQ8 1089 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 CNKSR1Q969H4 720 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 ZNF570Q96NI8 536 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 NT5C1BQ96P26 610 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 LBHD1Q9BQE6 289 aaPredicted RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 DDX28Q9NUL7 540 aaKnown RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 FGFR1OP2Q9NVK5 253 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 SNX2O60749 519 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 NR3C1P04150 777 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 LRPAP1P30533 357 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 MDM2Q00987 491 aaPredicted RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 FIGNQ5HY92 759 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 GPATCH4Q5T3I0 446 aaKnown RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 AGAP9Q5VTM2 703 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 NSMFQ6X4W1 530 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 LRRC49Q8IUZ0 686 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 SEPT8Q92599 483 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 ZFP69BQ9UJL9 534 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
NPHS1-202ENST00000378910 ZNF510Q9Y2H8 683 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 COMMD10Q9Y6G5 202 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
NPHS1-202ENST00000378910 PDLIM1O00151 329 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 TAF4O00268 1085 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 CD19P15391 556 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 HALP42357 657 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 LRP8Q14114 963 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 GIPC3Q8TF64 312 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 CFAP36Q96G28 342 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 TMEM260Q9NX78 707 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 SLC5A4Q9NY91 659 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 MYMKA6NI61 221 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 COPS2P61201 443 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 YWHAGP61981 247 aaKnown RBP eCLIP12.48□□□□□ -0.41
NPHS1-202ENST00000378910 CDK17Q00537 523 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 DRAP1Q14919 205 aaPredicted RBP12.48□□□□□ -0.41
NPHS1-202ENST00000378910 GRAMD1AQ96CP6 724 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 ANLNQ9NQW6 1124 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 USP40Q9NVE5 1235 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 NEURL4Q96JN8 1562 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 A0A087X0T9 212 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 GNPATO15228 680 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 STRNO43815 780 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 TOM1O60784 492 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 TDP2O95551 362 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 ABL1P00519 1130 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 KRT8P05787 483 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 FAM228BP0C875 321 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 CDR2Q01850 454 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 PTK2Q05397 1052 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 GRM4Q14833 912 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 SUSD4Q5VX71 490 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 FBXO11Q86XK2 927 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 CREG2Q8IUH2 290 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 BRSK2Q8IWQ3 736 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 SLC17A8Q8NDX2 589 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 DCTN4Q9UJW0 460 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
NPHS1-202ENST00000378910 POTEB3A0JP26 581 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms