RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CNTNAP1P78357 1384 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 IGF2BP3O00425 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 WNT7AO00755 349 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 CABYRO75952 493 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 NDUFA10O95299 355 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 GFPT1Q06210 699 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 ZRSR2Q15696 482 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 ARL13BQ3SXY8 428 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 GJB7Q6PEY0 223 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 NIPA1Q7RTP0 329 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 TRIM11Q96F44 468 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 INPP4AQ96PE3 977 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 PLCB1Q9NQ66 1216 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 HSF2BPO75031 334 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 SKIP12755 728 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 PCSK1P29120 753 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 KCNA1Q09470 495 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 YAF2Q8IY57 180 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 UHMK1Q8TAS1 419 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 GSDMBQ8TAX9 411 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF296Q8WUU4 475 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 PGLYRP2Q96PD5 576 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 HEMGNQ9BXL5 484 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 KBTBD4Q9NVX7 518 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 HEY1Q9Y5J3 304 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 RP1L1Q8IWN7 2480 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 COL1A1P02452 1464 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 CYP3A4P08684 503 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 SYN1P17600 705 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 ACO1P21399 889 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 ALDH1A3P47895 512 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 GUCY2FP51841 1108 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 AP3M2P53677 418 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF200P98182 395 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 FUT2Q10981 343 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 NOL9Q5SY16 702 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 RNF219Q5W0B1 726 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 BBS5Q8N3I7 341 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 CPA5Q8WXQ8 436 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 MAGOHBQ96A72 148 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 NT5C1AQ9BXI3 368 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 CEP72Q9P209 647 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 PCDHB12Q9Y5F1 795 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 MAD1L1Q9Y6D9 718 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
CRNKL1-202ENST00000377340 SGK1O00141 431 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 NDC80O14777 642 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 SEPT4O43236 478 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 IL18RAPO95256 599 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 URODP06132 367 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 IRF1P10914 325 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 SAT1P21673 171 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 EPHB1P54762 984 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 FSTL1Q12841 308 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 UGCGQ16739 394 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 ACOT1Q86TX2 421 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 C7orf61Q8IZ16 206 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 SLC35F6Q8N357 371 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 RBBP8NLQ8NC74 664 aaPredicted RBP9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 LPPQ93052 612 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 HAUS2Q9NVX0 235 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 CHORDC1Q9UHD1 332 aaPredicted RBP9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 TRPV2Q9Y5S1 764 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 C4BP0C0L5 1744 aa9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 TRPM3Q9HCF6 1732 aaPredicted RBP9.02□□□□□ -0.96
CRNKL1-202ENST00000377340 TREHO43280 583 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SMPD1P17405 629 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 EDRF1Q3B7T1 1238 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 DCAF4L1Q3SXM0 396 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SV2CQ496J9 727 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 CTXN3Q4LDR2 81 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 C2CD6Q53TS8 623 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 CCDC91Q7Z6B0 441 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SCFD1Q8WVM8 642 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 RNF25Q96BH1 459 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 ARHGAP39Q9C0H5 1083 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 PYCARDQ9ULZ3 195 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 NT5C1B-RDH14C9J2C7 533 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 H0YHG0 523 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 CYB561D2O14569 222 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SRGAP2O75044 1071 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 MFAP3LO75121 409 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 DUSP11O75319 330 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SRGAP2BP0DMP2 458 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SP100P23497 879 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 ACAT1P24752 427 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 CTCFP49711 727 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 FAM171A1Q5VUB5 890 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 TMEM199Q8N511 208 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 ENGASEQ8NFI3 743 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 CERS4Q9HA82 394 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 KCNK9Q9NPC2 374 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 NAGPAQ9UK23 515 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 STAP1Q9ULZ2 295 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 PTCH2Q9Y6C5 1203 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms