RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 GTF3C4Q9UKN8 822 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 RIC1Q4ADV7 1423 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 MAGEA4P43358 317 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 COPS2P61201 443 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 SWSAP1Q6NVH7 229 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 KCNK18Q7Z418 384 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 SERPINB12Q96P63 405 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 IVNS1ABPQ9Y6Y0 642 aa17.83■□□□□ 0.44
VARS-215ENST00000375663 ARL4AP40617 200 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 EPC2Q52LR7 807 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 EEPD1Q7L9B9 569 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 NLRP7Q8WX94 980 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 DDX27Q96GQ7 796 aaKnown RBP17.82■□□□□ 0.44
VARS-215ENST00000375663 SEMA4AQ9H3S1 761 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 NPHS2Q9NP85 383 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 RBAKQ9NYW8 714 aaPredicted RBP17.82■□□□□ 0.44
VARS-215ENST00000375663 STRIP2Q9ULQ0 834 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 UBE4BO95155 1302 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 TMC3Q7Z5M5 1100 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 PRPF38AQ8NAV1 312 aaKnown RBP17.82■□□□□ 0.44
VARS-215ENST00000375663 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 DNAJC3Q13217 504 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 RFX8Q6ZV50 586 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 LRP10Q7Z4F1 713 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 SUGP1Q8IWZ8 645 aaKnown RBP17.82■□□□□ 0.44
VARS-215ENST00000375663 ST13P4Q8IZP2 240 aaPredicted RBP17.82■□□□□ 0.44
VARS-215ENST00000375663 SMYD3Q9H7B4 428 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 AGO2Q9UKV8 859 aaKnown RBP17.82■□□□□ 0.44
VARS-215ENST00000375663 TACC3Q9Y6A5 838 aa17.82■□□□□ 0.44
VARS-215ENST00000375663 PTENP60484 403 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 SLC13A1Q9BZW2 595 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 P4HA2O15460 535 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 ECE2O60344 883 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 EPHB1P54762 984 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 PSMC1P62191 440 aaKnown RBP17.81■□□□□ 0.44
VARS-215ENST00000375663 ITIH4Q14624 930 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 ZNF699Q32M78 642 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 RC3H1Q5TC82 1133 aaKnown RBP17.81■□□□□ 0.44
VARS-215ENST00000375663 GLIS3Q8NEA6 775 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 MAGED2Q9UNF1 606 aaPredicted RBP17.81■□□□□ 0.44
VARS-215ENST00000375663 APOBEC2Q9Y235 224 aaKnown RBP17.81■□□□□ 0.44
VARS-215ENST00000375663 ERFP50548 548 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 LONP2Q86WA8 852 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 KCTD17Q8N5Z5 321 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 BTBD6Q96KE9 485 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 NLRP4Q96MN2 994 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 SIGLEC1Q9BZZ2 1709 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 WTIPA6NIX2 430 aaPredicted RBP17.81■□□□□ 0.44
VARS-215ENST00000375663 BTNL9Q6UXG8 535 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 CEP120Q8N960 986 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 RPS6KC1Q96S38 1066 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 KDM4CQ9H3R0 1056 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 PCDHA10Q9Y5I2 948 aa17.81■□□□□ 0.44
VARS-215ENST00000375663 RASSF10A6NK89 507 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 CFLARO15519 480 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 PSMC6P62333 389 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 FUT2Q10981 343 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 C3orf67Q6ZVT6 689 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 DTX3LQ8TDB6 740 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 ATG4AQ8WYN0 398 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 RTFDC1Q9BY42 306 aaPredicted RBP17.8■□□□□ 0.44
VARS-215ENST00000375663 FOXP3Q9BZS1 431 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 RPF1Q9H9Y2 349 aaKnown RBP17.8■□□□□ 0.44
VARS-215ENST00000375663 SLC38A10Q9HBR0 1119 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 UBN1Q9NPG3 1134 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 PCDHB2Q9Y5E7 798 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 CCDC195A0A1B0GUA6 201 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 TRPA1O75762 1119 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 SLC10A5Q5PT55 438 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 NUDCD3Q8IVD9 361 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.8■□□□□ 0.44
VARS-215ENST00000375663 MTRQ99707 1265 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 MED10Q9BTT4 135 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 DDX56Q9NY93 547 aaKnown RBP17.8■□□□□ 0.44
VARS-215ENST00000375663 HERC5Q9UII4 1024 aaKnown RBP17.8■□□□□ 0.44
VARS-215ENST00000375663 NQO1P15559 274 aaKnown RBP17.8■□□□□ 0.44
VARS-215ENST00000375663 ANKRD20A8PQ5CZ79 823 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 ATP8B4Q8TF62 1192 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 POLR3FQ9H1D9 316 aaPredicted RBP17.8■□□□□ 0.44
VARS-215ENST00000375663 TLK1Q9UKI8 766 aa17.8■□□□□ 0.44
VARS-215ENST00000375663 RALAP11233 206 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 PPWD1Q96BP3 646 aaKnown RBP17.79■□□□□ 0.44
VARS-215ENST00000375663 CENPKQ9BS16 269 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 TULP2O00295 520 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 UBOX5O94941 541 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 PGM1P36871 562 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 SLC27A3Q5K4L6 730 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 MOXD1Q6UVY6 613 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 LRRC55Q6ZSA7 311 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 RCOR2Q8IZ40 523 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 CDC42EP4Q9H3Q1 356 aaKnown RBP17.79■□□□□ 0.44
VARS-215ENST00000375663 RNF146Q9NTX7 359 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 ASNSD1Q9NWL6 643 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 GTPBP10A4D1E9 387 aaKnown RBP17.79■□□□□ 0.44
VARS-215ENST00000375663 ENO4A6NNW6 628 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.444e-52■■■□□ 18.8
VARS-215ENST00000375663 CES2O00748 559 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 FSBPO95073 299 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 MARK3P27448 753 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms