RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 FGD2Q7Z6J4 655 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 LCORLQ8N3X6 602 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 HDAC7Q8WUI4 952 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 OSCP1Q8WVF1 389 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 PAGE5Q96GU1 130 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 SPATA2Q9UM82 520 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 USTQ9Y2C2 406 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 CRTAPO75718 401 aaPredicted RBP6.96□□□□□ -1.3
UBR4-204ENST00000375254 MSH3P20585 1137 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 ABCB4P21439 1286 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 ZFP69Q49AA0 526 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 PACSIN1Q9BY11 444 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 CLK4Q9HAZ1 481 aaKnown RBP6.96□□□□□ -1.3
UBR4-204ENST00000375254 CARMIL2Q6F5E8 1435 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 RBM47A0AV96 593 aaKnown RBP6.96□□□□□ -1.3
UBR4-204ENST00000375254 CASP2P42575 452 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 ZNF654Q8IZM8 581 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 TMEM206Q9H813 350 aa6.96□□□□□ -1.3
UBR4-204ENST00000375254 POLGP54098 1239 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 TAP1Q03518 808 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 C11orf88Q6PI97 169 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 OR8H2Q8N162 312 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PCMTD2Q9NV79 361 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PLK2Q9NYY3 685 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 GLS2Q9UI32 602 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 GNPTGQ9UJJ9 305 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ATF6P18850 670 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ALCAMQ13740 583 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 KNOP1Q1ED39 458 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 LACTB2Q53H82 288 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 DARS2Q6PI48 645 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 IQCF2Q8IXL9 164 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 HSPH1Q92598 858 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 GPAMQ9HCL2 828 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ITM2BQ9Y287 266 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 FARP2O94887 1054 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 F8A1P23610 371 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CCSAPQ6IQ19 270 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 XKRXQ6PP77 449 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 LRRC17Q8N6Y2 441 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 LBHD1Q9BQE6 289 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 MND1Q9BWT6 205 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 SAYSD1Q9NPB0 183 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PSMC3IPQ9P2W1 217 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 A0A1B0GTH6 734 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 RXRGP48443 463 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 SESN2P58004 480 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 C2CD6Q53TS8 623 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TRMT2AQ8IZ69 625 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 VPS33AQ96AX1 596 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CCDC126Q96EE4 140 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CDH19Q9H159 772 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 INTS13Q9NVM9 706 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PCSK1NQ9UHG2 260 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TFDP2Q14188 446 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CENPPQ6IPU0 288 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 LRMDAQ9H2I8 198 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ENO1P06733 434 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 RARGP13631 454 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TCF3P15923 654 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 EFHC1Q5JVL4 640 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CFAP70Q5T0N1 1121 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 LRRC8DQ7L1W4 858 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 FAM9CQ8IZT9 166 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ABTB2Q8N961 1025 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 EPB41L4AQ9HCS5 686 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 PIK3R4Q99570 1358 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TYW5A2RUC4 315 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 FASP25445 335 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TMOD1P28289 359 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PKP1Q13835 747 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ZMYM1Q5SVZ6 1142 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 SNX31Q8N9S9 440 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ANKHQ9HCJ1 492 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 A0A1W2PQJ5 194 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 METTL21EPA6NDL7 271 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PRAMEP78395 509 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TRIM25Q14258 630 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 HIF1AQ16665 826 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 TMEM237Q96Q45 408 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 HSPD1P10809 573 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 YWHABP31946 246 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 EXOSC10Q01780 885 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 ALFQ53S48 1182 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 KRT77Q7Z794 578 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ERI1Q8IV48 349 aaKnown RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 CDCA5Q96FF9 252 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 NUAK2Q9H093 628 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 STON1Q9Y6Q2 735 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 KRT1P04264 644 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 CCDC130P13994 396 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 PTPRN2Q92932 1015 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 RNF34Q969K3 372 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 METTL22Q9BUU2 404 aaPredicted RBP6.95□□□□□ -1.3
UBR4-204ENST00000375254 C9orf16Q9BUW7 83 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ZNF180Q9UJW8 692 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 LRRC42Q9Y546 428 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 ZBED4O75132 1171 aa6.95□□□□□ -1.3
UBR4-204ENST00000375254 FTCDO95954 541 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms