RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 EPC2Q52LR7 807 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 KRT39Q6A163 491 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 TWF2Q6IBS0 349 aaKnown RBP18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 DPY19L2P1Q6NXN4 242 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 CD302Q8IX05 232 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 DRC7Q8IY82 874 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 SPC24Q8NBT2 197 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 SNX27Q96L92 541 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 ACAP3Q96P50 834 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 TRIM6Q9C030 488 aaPredicted RBP18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 HIPK3Q9H422 1215 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 NXF3Q9H4D5 531 aaKnown RBP18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 GCNT4Q9P109 453 aa18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.58
HLA-DMA-201ENST00000374843 KIAA0100Q14667 2235 aaKnown RBP18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 GOLGA6L6A8MZA4 724 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 NBNO60934 754 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 GYPCP04921 128 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 CLTBP09497 229 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 GSDMDP57764 484 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 ZACNQ401N2 412 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 XKR4Q5GH76 650 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 SV2AQ7L0J3 742 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 NT5DC4Q86YG4 428 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 EFCAB13Q8IY85 973 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 SMG8Q8ND04 991 aaKnown RBP18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 POP1Q99575 1024 aaKnown RBP18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 NUP58Q9BVL2 599 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 IFIH1Q9BYX4 1025 aaKnown RBP18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 WNT8AQ9H1J5 351 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 FAM105AQ9NUU6 356 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 ATP11BQ9Y2G3 1177 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 DERAQ9Y315 318 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 C2CD2Q9Y426 696 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 DAAM1Q9Y4D1 1078 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 IPPQ9Y573 584 aa18.65■□□□□ 0.58
HLA-DMA-201ENST00000374843 A0A1W2PQJ5 194 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 MGEA5O60502 916 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 ZNF623O75123 536 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 RECQL4O94761 1208 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 CXCL10P02778 98 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 C4BPAP04003 597 aaKnown RBP18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 PON1P27169 355 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 KLK7P49862 253 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 OSTNP61366 133 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 CETN1Q12798 172 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 PLEKHG4Q58EX7 1191 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 MRPL10Q7Z7H8 261 aaKnown RBP18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 HACE1Q8IYU2 909 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 LMO3Q8TAP4 145 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 TSPAN18Q96SJ8 248 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 LSM14BQ9BX40 385 aaKnown RBP18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 EDEM3Q9BZQ6 932 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 INTS2Q9H0H0 1204 aaKnown RBP18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 GANQ9H2C0 597 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 SIX2Q9NPC8 291 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 SNTG2Q9NY99 539 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 CNTN3Q9P232 1028 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 FBXL5Q9UKA1 691 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 PCDHB2Q9Y5E7 798 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 UMODL1Q5DID0 1318 aa18.64■□□□□ 0.57
HLA-DMA-201ENST00000374843 LACTBL1A8MY62 500 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 KIAA0355O15063 1070 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 NOL4O94818 638 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 SKIP12755 728 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 TNNI1P19237 187 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 ARID5BQ14865 1188 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 TDRD10Q5VZ19 366 aaKnown RBP18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 TRIM65Q6PJ69 517 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 ALKAL1Q6UXT8 129 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 CCDC150Q8NCX0 1101 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 OR5B17Q8NGF7 314 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 LINC01599Q8WXQ3 324 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 APBB2Q92870 758 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 CRACR2AQ9BSW2 395 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 FTHL17Q9BXU8 183 aa18.63■□□□□ 0.57
HLA-DMA-201ENST00000374843 A0A0U1RQF3 1178 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 EPHB6O15197 1021 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 MFAP3LO75121 409 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 NFICP08651 508 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 KCNE1P15382 129 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 TRIM21P19474 475 aaKnown RBP18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 EN2P19622 333 aaPredicted RBP18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 RFX1P22670 979 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 RFC2P35250 354 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 YARSP54577 528 aaKnown RBP18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 DUOXA2Q1HG44 320 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 PPFIBP1Q86W92 1011 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 FBXL13Q8NEE6 735 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 NEK11Q8NG66 645 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 TAS1R2Q8TE23 839 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 TSPYL2Q9H2G4 693 aaPredicted RBP18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 MMRN2Q9H8L6 949 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 RGS18Q9NS28 235 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 FAM207AQ9NSI2 230 aaPredicted RBP18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 CAPN11Q9UMQ6 739 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 HES2Q9Y543 173 aa18.62■□□□□ 0.57
HLA-DMA-201ENST00000374843 PDCD11Q14690 1871 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms