RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 SSR1P43307 286 aaKnown RBP14.62□□□□□ -0.07
USP49-201ENST00000373006 HP1BP3Q5SSJ5 553 aaPredicted RBP14.62□□□□□ -0.07
USP49-201ENST00000373006 CYP4F22Q6NT55 531 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 ZNF449Q6P9G9 518 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 OTOP1Q7RTM1 612 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 EPS8L1Q8TE68 723 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 CNKSR1Q969H4 720 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 MRRFQ96E11 262 aaKnown RBP14.62□□□□□ -0.07
USP49-201ENST00000373006 NAF1Q96HR8 494 aaKnown RBP14.62□□□□□ -0.07
USP49-201ENST00000373006 SH2D3AQ9BRG2 576 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 LRRC19Q9H756 370 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 SLCO1B3Q9NPD5 702 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 NINJ2Q9NZG7 142 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 ANAPC5Q9UJX4 755 aa14.62□□□□□ -0.07
USP49-201ENST00000373006 KIF3CO14782 793 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 ATP2B4P23634 1241 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 MTFR1Q15390 333 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 C2CD6Q53TS8 623 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 ARHGEF18Q6ZSZ5 1173 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 INTS8Q75QN2 995 aaKnown RBP14.61□□□□□ -0.07
USP49-201ENST00000373006 MAGEB18Q96M61 343 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 CBWD1Q9BRT8 395 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 WHRNQ9P202 907 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 GSTTP1A0A1W2PQM5 241 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 RASA4BC9J798 803 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 G3V3G9 751 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 RASA4O43374 803 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 CCNB1P14635 433 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 ITIH2P19823 946 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 IVDP26440 423 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 TMED2Q15363 201 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 DCAF8Q5TAQ9 597 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 CDCA2Q69YH5 1023 aaPredicted RBP14.61□□□□□ -0.07
USP49-201ENST00000373006 RHBDF2Q6PJF5 856 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 CERS5Q8N5B7 392 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 FBF1Q8TES7 1133 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 SNF8Q96H20 258 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 PPP1R12CQ9BZL4 782 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 SBF2Q86WG5 1849 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 VAMP7P51809 220 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 BLMHQ13867 455 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 EPC2Q52LR7 807 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 C15orf52Q6ZUT6 534 aaKnown RBP14.61□□□□□ -0.07
USP49-201ENST00000373006 OSBPL1AQ9BXW6 950 aa14.61□□□□□ -0.07
USP49-201ENST00000373006 R3HDM2Q9Y2K5 976 aaKnown RBP14.61□□□□□ -0.07
USP49-201ENST00000373006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.6□□□□□ -0.07
USP49-201ENST00000373006 A0A1W2PRG0 241 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 GOLGA8IPA6NC78 632 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 GOLGA8JA6NMD2 632 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 SNUPNO95149 360 aaKnown RBP14.6□□□□□ -0.07
USP49-201ENST00000373006 CFBP00751 764 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 HLA-DOAP06340 250 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 GM2AP17900 193 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 RAD23BP54727 409 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 WDR4P57081 412 aaKnown RBP14.6□□□□□ -0.07
USP49-201ENST00000373006 CETN1Q12798 172 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 SLC15A2Q16348 729 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 TMEM63BQ5T3F8 832 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 SLC5A5Q92911 643 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 NOCTQ9UK39 431 aaKnown RBP14.6□□□□□ -0.07
USP49-201ENST00000373006 PCDHAC2Q9Y5I4 1007 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 F5H6K3 240 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 K7ENM7 598 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 POLE2P56282 527 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 RNF43Q68DV7 783 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 CDC42EP5Q6NZY7 148 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 LLGL2Q6P1M3 1020 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 CAPN12Q6ZSI9 719 aa14.6□□□□□ -0.07
USP49-201ENST00000373006 CORO1CQ9ULV4 474 aaPredicted RBP14.6□□□□□ -0.07
USP49-201ENST00000373006 DDX39AO00148 427 aaKnown RBP14.59□□□□□ -0.07
USP49-201ENST00000373006 GDF11O95390 407 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 LINGO3P0C6S8 592 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 ATF2P15336 505 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 FMO1Q01740 532 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 STRN3Q13033 797 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 PLEKHO2Q8TD55 490 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 PSPC1Q8WXF1 523 aaKnown RBP14.59□□□□□ -0.07
USP49-201ENST00000373006 KREMEN1Q96MU8 473 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 KIAA1683Q9H0B3 1180 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 PKD2L1Q9P0L9 805 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 CHKBQ9Y259 395 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 IGLV3-22A0A075B6J6 115 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 FSCN2O14926 492 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 RRM1P23921 792 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 PCK1P35558 622 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 SESN3P58005 492 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 RASA3Q14644 834 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 SETDB1Q15047 1291 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 NFIL3Q16649 462 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 SYDE2Q5VT97 1194 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 STXBP4Q6ZWJ1 553 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 SIAH1Q8IUQ4 282 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 LRRC37BQ96QE4 947 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 RAB3IPQ96QF0 476 aaPredicted RBP14.59□□□□□ -0.07
USP49-201ENST00000373006 A0A1B0GVG6 124 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 CBX6O95503 412 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 FOSP01100 380 aaPredicted RBP14.59□□□□□ -0.07
USP49-201ENST00000373006 GNAT1P11488 350 aa14.59□□□□□ -0.07
USP49-201ENST00000373006 IL9RQ01113 521 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms