RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 VN1R3Q9BXE9 311 aa16.37■□□□□ 0.21
LMO4-201ENST00000370542 ADAM7Q9H2U9 754 aa16.37■□□□□ 0.21
LMO4-201ENST00000370542 KANSL3Q9P2N6 904 aa16.37■□□□□ 0.21
LMO4-201ENST00000370542 DNAJB4Q9UDY4 337 aa16.37■□□□□ 0.21
LMO4-201ENST00000370542 DDHD2O94830 711 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 CXCL14O95715 111 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 SPATA31C1P0DKV0 1188 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 SLC11A1P49279 550 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 ITIH3Q06033 890 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 SLC22A17Q8WUG5 538 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 UBXN4Q92575 508 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 RSAD1Q9HA92 442 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 UBN1Q9NPG3 1134 aa16.36■□□□□ 0.21
LMO4-201ENST00000370542 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
LMO4-201ENST00000370542 CACNA1GO43497 2377 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 NCOR2Q9Y618 2525 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 EFCAB8A8MWE9 144 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 TSPAN1O60635 241 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 LONRF3Q496Y0 759 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 RNF168Q8IYW5 571 aaPredicted RBP16.35■□□□□ 0.21
LMO4-201ENST00000370542 ADSSL1Q8N142 457 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 NECTIN4Q96NY8 510 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 TMEM60Q9H2L4 133 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 PSD3Q9NYI0 1048 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
LMO4-201ENST00000370542 DNAI1Q9UI46 699 aa16.35■□□□□ 0.21
LMO4-201ENST00000370542 ZSCAN12O43309 604 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 ALDH2P05091 517 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 GLRA2P23416 452 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 TXKP42681 527 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 ETF1P62495 437 aaKnown RBP16.34■□□□□ 0.21
LMO4-201ENST00000370542 MBTD1Q05BQ5 628 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 DSC1Q08554 894 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 ORC2Q13416 577 aaPredicted RBP16.34■□□□□ 0.21
LMO4-201ENST00000370542 CAPSQ13938 189 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 LLGL2Q6P1M3 1020 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 NOTUMQ6P988 496 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 DHX40Q8IX18 779 aaKnown RBP16.34■□□□□ 0.21
LMO4-201ENST00000370542 MNS1Q8NEH6 495 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 URGCPQ8TCY9 931 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 ASAP3Q8TDY4 903 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 RPGRIP1Q96KN7 1286 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 CNTNAP3BQ96NU0 1288 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 CNTNAP3Q9BZ76 1288 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
LMO4-201ENST00000370542 DZANK1Q9NVP4 752 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 INPP5FQ9Y2H2 1132 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 IPPQ9Y573 584 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 ZMYM2Q9UBW7 1377 aa16.34■□□□□ 0.21
LMO4-201ENST00000370542 NRP1O14786 923 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 IKBKBO14920 756 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 PNMA6AP0CW24 399 aaPredicted RBP16.33■□□□□ 0.2
LMO4-201ENST00000370542 RNASELQ05823 741 aaKnown RBP16.33■□□□□ 0.2
LMO4-201ENST00000370542 TRIM29Q14134 588 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 TFDP1Q14186 410 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 COLGALT2Q8IYK4 626 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 ENGASEQ8NFI3 743 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 NKD2Q969F2 451 aaPredicted RBP16.33■□□□□ 0.2
LMO4-201ENST00000370542 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 POLR3CQ9BUI4 534 aaPredicted RBP16.33■□□□□ 0.2
LMO4-201ENST00000370542 EIF2AQ9BY44 585 aaKnown RBP16.33■□□□□ 0.2
LMO4-201ENST00000370542 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
LMO4-201ENST00000370542 TUFT1Q9NNX1 390 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.2
LMO4-201ENST00000370542 MYO10Q9HD67 2058 aa16.33■□□□□ 0.2
LMO4-201ENST00000370542 A0A1B0GUA9 196 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.32■□□□□ 0.2
LMO4-201ENST00000370542 POTEMA6NI47 508 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 ERLIN2O94905 339 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 ZRANB2O95218 330 aaKnown RBP eCLIP16.32■□□□□ 0.2
LMO4-201ENST00000370542 PAPLNO95428 1278 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 ARF4P18085 180 aaPredicted RBP16.32■□□□□ 0.2
LMO4-201ENST00000370542 MTHFRP42898 656 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 TUBB2AQ13885 445 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 PTPN21Q16825 1174 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 KIAA1841Q6NSI8 718 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 CES5AQ6NT32 575 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 C11orf57Q6ZUT1 292 aaPredicted RBP16.32■□□□□ 0.2
LMO4-201ENST00000370542 PPFIBP1Q86W92 1011 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 CATSPER3Q86XQ3 398 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 GSTCDQ8NEC7 633 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 AUTS2Q8WXX7 1259 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 RMDN1Q96DB5 314 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 TUBB2BQ9BVA1 445 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 POMKQ9H5K3 350 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 MARCH5Q9NX47 278 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 MIOSQ9NXC5 875 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 FAN1Q9Y2M0 1017 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 GIT1Q9Y2X7 761 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 CFAP47Q6ZTR5 3102 aa16.32■□□□□ 0.2
LMO4-201ENST00000370542 ARL5CA6NH57 179 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 C1RP00736 705 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 POMCP01189 267 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 SOD2P04179 222 aa16.31■□□□□ 0.2
LMO4-201ENST00000370542 ITGA4P13612 1032 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms