RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 FAM13AO94988 1023 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 CNPP09543 421 aaKnown RBP22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 HOXB8P17481 243 aaPredicted RBP22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 GTF2BQ00403 316 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 DSG1Q02413 1049 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 STRN3Q13033 797 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 HSP90AA2PQ14568 343 aaPredicted RBP22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 ATL3Q6DD88 541 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 FUT10Q6P4F1 479 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 CD300LGQ6UXG3 332 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 CCDC73Q6ZRK6 1079 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 ADHFE1Q8IWW8 467 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 MYCT1Q8N699 235 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 RASSF8Q8NHQ8 419 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 CASP10Q92851 521 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 STRA6Q9BX79 667 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 TBX20Q9UMR3 447 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 ZDHHC9Q9Y397 364 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 USP15Q9Y4E8 981 aaPredicted RBP22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 PLXNA3P51805 1871 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 MTCL1Q9Y4B5 1905 aaKnown RBP22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 SMIM28A0A1B0GU29 152 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 FAM189A1O60320 539 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 HSP90AA1P07900 732 aaKnown RBP22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 KCNE1P15382 129 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 TXLNAP40222 546 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 E2F4Q16254 413 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 FOXD4L5Q5VV16 416 aaPredicted RBP22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 ZBTB33Q86T24 672 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 GJD3Q8N144 294 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 FOXD4L4Q8WXT5 416 aaPredicted RBP22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 RABGGTAQ92696 567 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 SNX27Q96L92 541 aa22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 ZMAT2Q96NC0 199 aaKnown RBP22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 CCDC94Q9BW85 323 aaPredicted RBP22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 MRPL17Q9NRX2 175 aaKnown RBP22.49■■□□□ 1.19
SMNDC1-201ENST00000369592 FRMD3A2A2Y4 597 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 CASTOR2A6NHX0 329 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 TMEM189-UBE2V1I3L0A0 370 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 PPP1R37O75864 691 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 KIF4AO95239 1232 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 EPCAMP16422 314 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 IGFBP6P24592 240 aaPredicted RBP22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 NOLC1Q14978 699 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 SLC10A6Q3KNW5 377 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 LLGL2Q6P1M3 1020 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 SLC39A4Q6P5W5 647 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 SHC4Q6S5L8 630 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 SPRYD3Q8NCJ5 442 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 DDX12PQ92771 950 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 CNTN3Q9P232 1028 aa22.48■■□□□ 1.19
SMNDC1-201ENST00000369592 CUTAO60888 179 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 SRGAP2BP0DMP2 458 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 NMT1P30419 496 aaKnown RBP22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 GLUD2P49448 558 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 CLCN4P51793 760 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 SOX4Q06945 474 aaPredicted RBP22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 GLRA4Q5JXX5 417 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 SV2BQ7L1I2 683 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 ZNF720Q7Z2F6 126 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 PPFIBP1Q86W92 1011 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 MAP4K3Q8IVH8 894 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 ACAP3Q96P50 834 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 TCHPQ9BT92 498 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 PANK2Q9BZ23 570 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 TOPORSQ9NS56 1045 aaPredicted RBP22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 RCOR1Q9UKL0 485 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 SSX2IPQ9Y2D8 614 aa22.47■■□□□ 1.19
SMNDC1-201ENST00000369592 K7ENM7 598 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 TEX28O15482 410 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 CLDN3O15551 220 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 TBCAO75347 108 aaKnown RBP22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 PAPLNO95428 1278 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 C1RP00736 705 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 KRT18P05783 430 aaKnown RBP22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 URODP06132 367 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 ADRB2P07550 413 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 OSTNP61366 133 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 UPP1Q16831 310 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 DYMQ7RTS9 669 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 EMILIN2Q9BXX0 1053 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 SEL1LQ9UBV2 794 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 STYXL1Q9Y6J8 313 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 TCHHQ07283 1943 aa22.46■■□□□ 1.19
SMNDC1-201ENST00000369592 A0A0B4J269 797 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 PI4K2BG5E9Z4 385 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 ABCD1P33897 745 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 STAT6P42226 847 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 YARSP54577 528 aaKnown RBP22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 CBX2Q14781 532 aaPredicted RBP22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 USP41Q3LFD5 358 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 SFR1Q86XK3 245 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 KCNG4Q8TDN1 519 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 B3GALT6Q96L58 329 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 UROC1Q96N76 676 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 ADAM7Q9H2U9 754 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 DZANK1Q9NVP4 752 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 KBTBD4Q9NVX7 518 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 FNIP2Q9P278 1114 aa22.45■■□□□ 1.18
SMNDC1-201ENST00000369592 ANKFY1Q9P2R3 1169 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms