RNA–Protein interactions for RNA: ENST00000368223.3

NES-201, Transcript of nestin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NES, Length 5,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NES-201ENST00000368223 TRIM45Q9H8W5 580 aaPredicted RBP20.8■□□□□ 0.92
NES-201ENST00000368223 EML4Q9HC35 981 aaKnown RBP20.8■□□□□ 0.92
NES-201ENST00000368223 HSPBP1Q9NZL4 362 aa20.8■□□□□ 0.92
NES-201ENST00000368223 CCDC78A2IDD5 438 aa20.8■□□□□ 0.92
NES-201ENST00000368223 CYP19A1P11511 503 aaPredicted RBP20.8■□□□□ 0.92
NES-201ENST00000368223 AP3M2P53677 418 aa20.8■□□□□ 0.92
NES-201ENST00000368223 TPI1P60174 286 aa20.8■□□□□ 0.92
NES-201ENST00000368223 ARHGEF1Q92888 912 aaKnown RBP20.8■□□□□ 0.92
NES-201ENST00000368223 WWP1Q9H0M0 922 aa20.8■□□□□ 0.92
NES-201ENST00000368223 RUBCNLQ9H714 662 aa20.8■□□□□ 0.92
NES-201ENST00000368223 PDXKO00764 312 aa20.8■□□□□ 0.92
NES-201ENST00000368223 FOXO4P98177 505 aa20.8■□□□□ 0.92
NES-201ENST00000368223 KCNB1Q14721 858 aa20.8■□□□□ 0.92
NES-201ENST00000368223 STAT4Q14765 748 aa20.8■□□□□ 0.92
NES-201ENST00000368223 COBLL1Q53SF7 1204 aa20.8■□□□□ 0.92
NES-201ENST00000368223 ATL2Q8NHH9 583 aa20.8■□□□□ 0.92
NES-201ENST00000368223 ZNF560Q96MR9 790 aa20.8■□□□□ 0.92
NES-201ENST00000368223 CHP1Q99653 195 aa20.8■□□□□ 0.92
NES-201ENST00000368223 TRIM54Q9BYV2 358 aa20.8■□□□□ 0.92
NES-201ENST00000368223 PGM1P36871 562 aa20.8■□□□□ 0.92
NES-201ENST00000368223 CDK17Q00537 523 aa20.8■□□□□ 0.92
NES-201ENST00000368223 WDR72Q3MJ13 1102 aa20.8■□□□□ 0.92
NES-201ENST00000368223 PPHLN1Q8NEY8 458 aaKnown RBP20.8■□□□□ 0.92
NES-201ENST00000368223 FAM84BQ96KN1 310 aaPredicted RBP20.8■□□□□ 0.92
NES-201ENST00000368223 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.8■□□□□ 0.92
NES-201ENST00000368223 SNX12Q9UMY4 172 aa20.8■□□□□ 0.92
NES-201ENST00000368223 CFAP73A6NFT4 308 aa20.8■□□□□ 0.92
NES-201ENST00000368223 RGS7P49802 495 aa20.8■□□□□ 0.92
NES-201ENST00000368223 RARS2Q5T160 578 aaKnown RBP20.8■□□□□ 0.92
NES-201ENST00000368223 NEDD1Q8NHV4 660 aa20.8■□□□□ 0.92
NES-201ENST00000368223 LONRF1Q17RB8 773 aa20.79■□□□□ 0.92
NES-201ENST00000368223 JPH1Q9HDC5 661 aaPredicted RBP20.79■□□□□ 0.92
NES-201ENST00000368223 TUFT1Q9NNX1 390 aa20.79■□□□□ 0.92
NES-201ENST00000368223 FMR1Q06787 632 aaKnown RBP eCLIP20.79■□□□□ 0.92
NES-201ENST00000368223 HIC1Q14526 733 aa20.79■□□□□ 0.92
NES-201ENST00000368223 MAPRE2Q15555 327 aa20.79■□□□□ 0.92
NES-201ENST00000368223 ACBD5Q5T8D3 534 aaPredicted RBP20.79■□□□□ 0.92
NES-201ENST00000368223 FARP1Q9Y4F1 1045 aaPredicted RBP20.79■□□□□ 0.92
NES-201ENST00000368223 GFAPP14136 432 aa20.79■□□□□ 0.92
NES-201ENST00000368223 GRIK1P39086 918 aa20.79■□□□□ 0.92
NES-201ENST00000368223 SLC1A1P43005 524 aa20.79■□□□□ 0.92
NES-201ENST00000368223 GRAMD1AQ96CP6 724 aa20.79■□□□□ 0.92
NES-201ENST00000368223 hCG_2014768A0A024R1R8 64 aa20.79■□□□□ 0.92
NES-201ENST00000368223 ACOT2P49753 483 aa20.79■□□□□ 0.92
NES-201ENST00000368223 SH2D3CQ8N5H7 860 aa20.79■□□□□ 0.92
NES-201ENST00000368223 TRAF3IP3Q9Y228 551 aa20.79■□□□□ 0.92
NES-201ENST00000368223 AXIN2Q9Y2T1 843 aa20.79■□□□□ 0.92
NES-201ENST00000368223 RALAP11233 206 aa20.78■□□□□ 0.92
NES-201ENST00000368223 APOBEC3FQ8IUX4 373 aaKnown RBP20.78■□□□□ 0.92
NES-201ENST00000368223 USP33Q8TEY7 942 aa20.78■□□□□ 0.92
NES-201ENST00000368223 OTULINQ96BN8 352 aa20.78■□□□□ 0.92
NES-201ENST00000368223 LBHD1Q9BQE6 289 aaPredicted RBP20.78■□□□□ 0.92
NES-201ENST00000368223 PIDD1Q9HB75 910 aa20.78■□□□□ 0.92
NES-201ENST00000368223 SLC16A3O15427 465 aaKnown RBP20.78■□□□□ 0.92
NES-201ENST00000368223 IL10P22301 178 aa20.78■□□□□ 0.92
NES-201ENST00000368223 CYTH1Q15438 398 aa20.78■□□□□ 0.92
NES-201ENST00000368223 TRIM9Q9C026 710 aa20.78■□□□□ 0.92
NES-201ENST00000368223 MAD2L2Q9UI95 211 aa20.78■□□□□ 0.92
NES-201ENST00000368223 PIN4Q9Y237 131 aaKnown RBP20.78■□□□□ 0.92
NES-201ENST00000368223 BLVRAP53004 296 aa20.78■□□□□ 0.92
NES-201ENST00000368223 MKRN4PQ13434 485 aaPredicted RBP20.78■□□□□ 0.92
NES-201ENST00000368223 TMEM143Q96AN5 459 aa20.78■□□□□ 0.92
NES-201ENST00000368223 TJP2Q9UDY2 1190 aa20.78■□□□□ 0.92
NES-201ENST00000368223 CHN1P15882 459 aa20.78■□□□□ 0.92
NES-201ENST00000368223 HMGCS2P54868 508 aa20.78■□□□□ 0.92
NES-201ENST00000368223 HDAC4P56524 1084 aa20.78■□□□□ 0.92
NES-201ENST00000368223 CEP55Q53EZ4 464 aa20.78■□□□□ 0.92
NES-201ENST00000368223 RCOR2Q8IZ40 523 aa20.78■□□□□ 0.92
NES-201ENST00000368223 ALDH8A1Q9H2A2 487 aaPredicted RBP20.78■□□□□ 0.92
NES-201ENST00000368223 AGAP1Q9UPQ3 857 aa20.78■□□□□ 0.92
NES-201ENST00000368223 SEPT8Q92599 483 aa20.77■□□□□ 0.92
NES-201ENST00000368223 EPAS1Q99814 870 aa20.77■□□□□ 0.92
NES-201ENST00000368223 NPHS2Q9NP85 383 aa20.77■□□□□ 0.92
NES-201ENST00000368223 APEX2Q9UBZ4 518 aa20.77■□□□□ 0.92
NES-201ENST00000368223 HSD17B4P51659 736 aa20.77■□□□□ 0.92
NES-201ENST00000368223 C18orf8Q96DM3 657 aa20.77■□□□□ 0.92
NES-201ENST00000368223 ISCA1Q9BUE6 129 aa20.77■□□□□ 0.92
NES-201ENST00000368223 KLC4Q9NSK0 619 aa20.77■□□□□ 0.92
NES-201ENST00000368223 TRIM10Q9UDY6 481 aa20.77■□□□□ 0.92
NES-201ENST00000368223 PHF2O75151 1096 aa20.77■□□□□ 0.92
NES-201ENST00000368223 RABGAP1LQ5R372 815 aa20.77■□□□□ 0.92
NES-201ENST00000368223 BRINP3Q76B58 766 aa20.77■□□□□ 0.92
NES-201ENST00000368223 TNIP3Q96KP6 325 aa20.77■□□□□ 0.92
NES-201ENST00000368223 TMEM117Q9H0C3 514 aa20.77■□□□□ 0.92
NES-201ENST00000368223 DBR1Q9UK59 544 aaKnown RBP20.77■□□□□ 0.92
NES-201ENST00000368223 MBD5Q9P267 1494 aa20.77■□□□□ 0.92
NES-201ENST00000368223 STAT5BP51692 787 aa20.77■□□□□ 0.91
NES-201ENST00000368223 DTX3LQ8TDB6 740 aa20.77■□□□□ 0.91
NES-201ENST00000368223 PCDHGB4Q9UN71 923 aa20.77■□□□□ 0.91
NES-201ENST00000368223 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.91
NES-201ENST00000368223 POLRMTO00411 1230 aaKnown RBP20.76■□□□□ 0.91
NES-201ENST00000368223 MEFVO15553 781 aaPredicted RBP20.76■□□□□ 0.91
NES-201ENST00000368223 APRTP07741 180 aa20.76■□□□□ 0.91
NES-201ENST00000368223 EFNA5P52803 228 aa20.76■□□□□ 0.91
NES-201ENST00000368223 MTMR2Q13614 643 aa20.76■□□□□ 0.91
NES-201ENST00000368223 PNPLA7Q6ZV29 1317 aa20.76■□□□□ 0.91
NES-201ENST00000368223 SAMD9LQ8IVG5 1584 aa20.76■□□□□ 0.91
NES-201ENST00000368223 ANGPT2O15123 496 aa20.76■□□□□ 0.91
NES-201ENST00000368223 MDH1P40925 334 aaKnown RBP20.76■□□□□ 0.91
NES-201ENST00000368223 SLC18A3Q16572 532 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms