RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 KRT17Q04695 432 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 MYBPC2Q14324 1141 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ANKRD12Q6UB98 2062 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 CCT8L2Q96SF2 557 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 AKAP12Q02952 1782 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 SNRNP35Q16560 246 aaKnown RBP12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 ICA1LQ8NDH6 482 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 APOL6Q9BWW8 343 aa12.72□□□□□ -0.37
CDC42BPA-203ENST00000366766 E2F5Q15329 346 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZBED8Q8IZ13 594 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 MYO9BQ13459 2157 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 APOEP02649 317 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 MED15Q96RN5 788 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 RSAD1Q9HA92 442 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 RPLP2P05387 115 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.379e-7■■■□□ 17
CDC42BPA-203ENST00000366766 SCARF1Q14162 830 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 EPAS1Q99814 870 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 SRLQ86TD4 932 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 HPSEQ9Y251 543 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 GOLGA8IPA6NC78 632 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 GZMAP12544 262 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 PEX19P40855 299 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 ARSEP51690 589 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 KCNQ4P56696 695 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 SPATA21Q7Z572 469 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 USP38Q8NB14 1042 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 ARHGEF26Q96DR7 871 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 SAAL1Q96ER3 474 aa12.71□□□□□ -0.37
CDC42BPA-203ENST00000366766 MCF2P10911 925 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 INPP1P49441 399 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 SLC35G2Q8TBE7 412 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 ERP44Q9BS26 406 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 TROAPQ12815 778 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 FAM102AQ5T9C2 384 aaPredicted RBP12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 FRA10AC1Q70Z53 315 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 DDX50Q9BQ39 737 aaKnown RBP12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 ANTXR2P58335 489 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 NOP14P78316 857 aaKnown RBP12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 SF3A3Q12874 501 aaKnown RBP eCLIP12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 SLC10A5Q5PT55 438 aa12.71□□□□□ -0.38
CDC42BPA-203ENST00000366766 ARHGAP23Q9P227 1491 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 JCADQ9P266 1359 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 NVLO15381 856 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 HNRNPRO43390 633 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 LSP1P33241 339 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 ACADSBP45954 432 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 DSTYKQ6XUX3 929 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 TEX9Q8N6V9 391 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 TRABDQ9H4I3 376 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 CASP1P29466 404 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 CAMTA2O94983 1202 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 APOA4P06727 396 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 ABCE1P61221 599 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 NT5DC1Q5TFE4 455 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 EHD2Q9NZN4 543 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 ARHGAP26Q9UNA1 814 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 PPME1Q9Y570 386 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 CES2O00748 559 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 SCFD1Q8WVM8 642 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 HINFPQ9BQA5 517 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 M0QYV0 167 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 MCUQ8NE86 351 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 DTNBP1Q96EV8 351 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 NAT9Q9BTE0 207 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 GALCP54803 685 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 RBP5P82980 135 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 SERPINB12Q96P63 405 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 RBM15Q96T37 977 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■□□□ 14.2
CDC42BPA-203ENST00000366766 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 HEY1Q9Y5J3 304 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 SNX2O60749 519 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 CDH6P55285 790 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 SLC10A4Q96EP9 437 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 AMACRQ9UHK6 382 aa12.7□□□□□ -0.38
CDC42BPA-203ENST00000366766 EPHB1P54762 984 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 ZNF746Q6NUN9 644 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 CMTM5Q96DZ9 223 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 MTO1Q9Y2Z2 717 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 EEF1B2P24534 225 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 COG2Q14746 738 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 PTPN21Q16825 1174 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 GOLGA8TH3BQL2 631 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 CCND1P24385 295 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 WRNIP1Q96S55 665 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms