RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 WDR49Q8IV35 697 aa26.95■■□□□ 1.9
SHARPIN-201ENST00000359551 NEK11Q8NG66 645 aa26.95■■□□□ 1.9
SHARPIN-201ENST00000359551 LMO3Q8TAP4 145 aa26.95■■□□□ 1.9
SHARPIN-201ENST00000359551 DIS3LQ8TF46 1054 aaKnown RBP26.95■■□□□ 1.9
SHARPIN-201ENST00000359551 CACTINQ8WUQ7 758 aaKnown RBP26.95■■□□□ 1.9
SHARPIN-201ENST00000359551 TOX2Q96NM4 488 aa26.95■■□□□ 1.9
SHARPIN-201ENST00000359551 LSM14BQ9BX40 385 aaKnown RBP26.95■■□□□ 1.9
SHARPIN-201ENST00000359551 AKR1B15C9JRZ8 316 aaPredicted RBP26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 RNF225M0QZC1 329 aaPredicted RBP26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 TLR3O15455 904 aaKnown RBP26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 MFAP3LO75121 409 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 CXCL8P10145 99 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 GHRP10912 638 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 AP3M2P53677 418 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 CETN1Q12798 172 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 BFSP2Q13515 415 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 ZACNQ401N2 412 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 SV2AQ7L0J3 742 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 CNGA4Q8IV77 575 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 LRRC8AQ8IWT6 810 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 TRIM44Q96DX7 344 aaPredicted RBP26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 GANQ9H2C0 597 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 SIX2Q9NPC8 291 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 PADI3Q9ULW8 664 aa26.94■■□□□ 1.9
SHARPIN-201ENST00000359551 C4BPAP04003 597 aaKnown RBP26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 TNNI1P19237 187 aa26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 TRIM65Q6PJ69 517 aa26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 CPLX3Q8WVH0 158 aa26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 ACAP3Q96P50 834 aa26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 CCDC94Q9BW85 323 aaPredicted RBP26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 ASB7Q9H672 318 aa26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 FBXL5Q9UKA1 691 aa26.93■■□□□ 1.9
SHARPIN-201ENST00000359551 PITPNM1O00562 1244 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 ATN1P54259 1190 aaPredicted RBP26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 NFX1Q12986 1120 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 PAK2Q13177 524 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 SLC10A6Q3KNW5 377 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 EHBP1Q8NDI1 1231 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 MCOLN1Q9GZU1 580 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 CEP72Q9P209 647 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 PQBP1O60828 265 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 SELPP16109 830 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 CD52P31358 61 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 ADKP55263 362 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 GOLGA8FQ08AF8 430 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 GOLGA8DPQ0D2H9 430 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 MBTPS1Q14703 1052 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 KLHDC7AQ5VTJ3 777 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 TMEM106CQ9BVX2 250 aa26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 TRIM6Q9C030 488 aaPredicted RBP26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 INTS2Q9H0H0 1204 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 LUC7L2Q9Y383 392 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-201ENST00000359551 ZBED6P86452 979 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 LMBRD2Q68DH5 695 aaPredicted RBP26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 LRRC8DQ7L1W4 858 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 FBXL13Q8NEE6 735 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 OR5B17Q8NGF7 314 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 PANX2Q96RD6 677 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 TRAIPQ9BWF2 469 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 KCNF1Q9H3M0 494 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 PLEKHA5Q9HAU0 1116 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 DAAM1Q9Y4D1 1078 aa26.91■■□□□ 1.9
SHARPIN-201ENST00000359551 ACTN1P12814 892 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 KRT9P35527 623 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 DSC3Q14574 896 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 TDRD10Q5VZ19 366 aaKnown RBP26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 TWF2Q6IBS0 349 aaKnown RBP26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 CD302Q8IX05 232 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 EFCAB13Q8IY85 973 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 TAS1R2Q8TE23 839 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 NXF3Q9H4D5 531 aaKnown RBP26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 C11orf49Q9H6J7 331 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 SNTG2Q9NY99 539 aa26.9■■□□□ 1.9
SHARPIN-201ENST00000359551 LACTBL1A8MY62 500 aa26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 APBA1Q02410 837 aa26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 TRIM60Q495X7 471 aa26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 SMG8Q8ND04 991 aaKnown RBP26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 BAP1Q92560 729 aa26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 FAM212AQ96EL1 285 aa26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 DNAJC7Q99615 494 aa26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 TMX1Q9H3N1 280 aa26.89■■□□□ 1.9
SHARPIN-201ENST00000359551 DCDC2CA8MYV0 355 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 UCHL3P15374 230 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 TLE2Q04725 743 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 FAAP100Q0VG06 881 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 DUOXA2Q1HG44 320 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 NT5DC4Q86YG4 428 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 SEMA4DQ92854 862 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 PAWRQ96IZ0 340 aaKnown RBP26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 FAM84AQ96KN4 292 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 ABHD10Q9NUJ1 306 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 RAB20Q9NX57 234 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 IPPQ9Y573 584 aa26.89■■□□□ 1.89
SHARPIN-201ENST00000359551 RBAK-RBAKDNI3L0D1 243 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 FECHP22830 423 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 POLR2FP61218 127 aaKnown RBP26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 LRMPQ12912 555 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 ALKAL1Q6UXT8 129 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 SNX27Q96L92 541 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 ZNF830Q96NB3 372 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms