RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 LGALS16A8MUM7 142 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 AP3B1O00203 1094 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 ARIH2O95376 493 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 IFT88Q13099 833 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 NNTQ13423 1086 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 SLC15A2Q16348 729 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 FASTKD1Q53R41 847 aaKnown RBP13.72□□□□□ -0.21
NLRC3-202ENST00000359128 WDR48Q8TAF3 677 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 SLC16A10Q8TF71 515 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 CAPN11Q9UMQ6 739 aa13.72□□□□□ -0.21
NLRC3-202ENST00000359128 TLR2O60603 784 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 NPTXRO95502 500 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 KCNA2P16389 499 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 NOTUMQ6P988 496 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 TRIM48Q8IWZ4 208 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 MB21D2Q8IYB1 491 aaPredicted RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 MORC4Q8TE76 937 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 KIFC3Q9BVG8 833 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 TMEM39BQ9GZU3 492 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 VCPKMTQ9H867 229 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 SMAD1Q15797 465 aaKnown RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 ATF7IP2Q5U623 682 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 BARGINQ6ZT62 677 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 SMAP1Q8IYB5 467 aaPredicted RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 RGS7P49802 495 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 TOB2Q14106 344 aaPredicted RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 ZC3H12BQ5HYM0 836 aaKnown RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 TBC1D1Q86TI0 1168 aaPredicted RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 PPM1NQ8N819 430 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 EIF2AQ9BY44 585 aaKnown RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 ADARB2Q9NS39 739 aaKnown RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 QRICH2Q9H0J4 1663 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 ALS2CLQ60I27 953 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 ARHGAP18Q8N392 663 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 MRPL40Q9NQ50 206 aaKnown RBP13.71□□□□□ -0.21
NLRC3-202ENST00000359128 INTUQ9ULD6 942 aa13.71□□□□□ -0.21
NLRC3-202ENST00000359128 HBP1O60381 514 aa13.71□□□□□ -0.22
NLRC3-202ENST00000359128 NDUFB10O96000 172 aa13.71□□□□□ -0.22
NLRC3-202ENST00000359128 PPP3CCP48454 512 aa13.71□□□□□ -0.22
NLRC3-202ENST00000359128 PRKCEQ02156 737 aa13.71□□□□□ -0.22
NLRC3-202ENST00000359128 PATL1Q86TB9 770 aaKnown RBP13.71□□□□□ -0.22
NLRC3-202ENST00000359128 OOSP2Q86WS3 158 aa13.71□□□□□ -0.22
NLRC3-202ENST00000359128 CDV3Q9UKY7 258 aaKnown RBP13.71□□□□□ -0.22
NLRC3-202ENST00000359128 SCAF8Q9UPN6 1271 aaKnown RBP13.71□□□□□ -0.22
NLRC3-202ENST00000359128 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.22
NLRC3-202ENST00000359128 KRT14P02533 472 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 PCSK1P29120 753 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 CASP1P29466 404 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 CDC27P30260 824 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 EPHX2P34913 555 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 LAMB3Q13751 1172 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 ARRDC4Q8NCT1 418 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 YME1L1Q96TA2 773 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 A0A087WUV0 522 aaPredicted RBP13.7□□□□□ -0.22
NLRC3-202ENST00000359128 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 EEF2KO00418 725 aaKnown RBP13.7□□□□□ -0.22
NLRC3-202ENST00000359128 SEC31AO94979 1220 aaKnown RBP13.7□□□□□ -0.22
NLRC3-202ENST00000359128 CHRNA3P32297 505 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
NLRC3-202ENST00000359128 ACOT2P49753 483 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 ZNF543Q08ER8 600 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 MORF4L2Q15014 288 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 EPM2AIP1Q7L775 607 aaPredicted RBP13.7□□□□□ -0.22
NLRC3-202ENST00000359128 PLEKHH3Q7Z736 793 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 STN1Q9H668 368 aaKnown RBP13.7□□□□□ -0.22
NLRC3-202ENST00000359128 RGL1Q9NZL6 768 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 NYAP2Q9P242 653 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 CDC42BPBQ9Y5S2 1711 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 ODC1P11926 461 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 LIG3P49916 1009 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 BFSP2Q13515 415 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 FRMD5Q7Z6J6 570 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 PIP4K2CQ8TBX8 421 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 CATSPERBQ9H7T0 1116 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 SPHKAPQ2M3C7 1700 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 A0A0G2JND7 137 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 SGSM1Q2NKQ1 1148 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 TAGAPQ8N103 731 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 USP33Q8TEY7 942 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 FBXO41Q8TF61 875 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 SNX24Q9Y343 169 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 RASA4BC9J798 803 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 GPR182O15218 404 aa13.7□□□□□ -0.22
NLRC3-202ENST00000359128 RASA4O43374 803 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms