RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 RIBC1Q8N443 379 aaPredicted RBP18.92■□□□□ 0.62
RTN4-204ENST00000357732 N4BP2L2Q92802 583 aaPredicted RBP18.92■□□□□ 0.62
RTN4-204ENST00000357732 TMEM8AQ9HCN3 771 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 BAIAP2L1Q9UHR4 511 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 RARRES1P49788 294 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 NCKAP1LP55160 1127 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 SLC8A3P57103 927 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 VSTM1Q6UX27 236 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 ARHGEF18Q6ZSZ5 1173 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 HAUS6Q7Z4H7 955 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 SLC47A2Q86VL8 602 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 CCDC25Q86WR0 208 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 TMC2Q8TDI7 906 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 RXFP1Q9HBX9 757 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 ABCF3Q9NUQ8 709 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 ASIC3Q9UHC3 531 aa18.92■□□□□ 0.62
RTN4-204ENST00000357732 COPS2P61201 443 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 NCALDP61601 193 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 CCDC15Q0P6D6 951 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 ACVR2BQ13705 512 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 CRYMQ14894 314 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 LONRF1Q17RB8 773 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 PPP1R21Q6ZMI0 780 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 SPATA21Q7Z572 469 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 NT5C1BQ96P26 610 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 CSRNP1Q96S65 589 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 CCDC77Q9BR77 488 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.91■□□□□ 0.62
RTN4-204ENST00000357732 SCN9AQ15858 1988 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 TCP11X1B4DZS4 312 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 CDH16O75309 829 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 UBOX5O94941 541 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 IVDP26440 423 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 KCNJ1P48048 391 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 CCDC174Q6PII3 467 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 ZNF677Q86XU0 584 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 ATL2Q8NHH9 583 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 UHMK1Q8TAS1 419 aaKnown RBP18.91■□□□□ 0.62
RTN4-204ENST00000357732 PLEKHO2Q8TD55 490 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 HELQQ8TDG4 1101 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 DDX1Q92499 740 aaKnown RBP18.91■□□□□ 0.62
RTN4-204ENST00000357732 RSRC1Q96IZ7 334 aaKnown RBP18.91■□□□□ 0.62
RTN4-204ENST00000357732 MAGEB18Q96M61 343 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 MTFR1LQ9H019 292 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 PRKAG3Q9UGI9 489 aa18.91■□□□□ 0.62
RTN4-204ENST00000357732 CLDN3O15551 220 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 ATMINO43313 823 aaPredicted RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 ZC3H11AO75152 810 aaKnown RBP eCLIP18.9■□□□□ 0.621e-32■■■■□ 22.5
RTN4-204ENST00000357732 QARSP47897 775 aaKnown RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 HSD17B4P51659 736 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 MAP2K1Q02750 393 aaPredicted RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 CLEC16AQ2KHT3 1053 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 FAM133BQ5BKY9 247 aaKnown RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 UBAP2Q5T6F2 1119 aaKnown RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 RNF43Q68DV7 783 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 CC2D2BQ6DHV5 1058 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 ACER1Q8TDN7 264 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 TCP11Q8WWU5 503 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 KAT5Q92993 513 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 ZHX2Q9Y6X8 837 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 ACSL3O95573 720 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 CLTAP09496 248 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 DLATP10515 647 aaKnown RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 ATF2P15336 505 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 STRN3Q13033 797 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 NR1H3Q13133 447 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 STAT4Q14765 748 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 SNRNP35Q16560 246 aaKnown RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 TBC1D1Q86TI0 1168 aaPredicted RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 PRMT6Q96LA8 375 aaPredicted RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 DDX23Q9BUQ8 820 aaKnown RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 ECT2Q9H8V3 914 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 FGFR1OP2Q9NVK5 253 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 RGPD3A6NKT7 1758 aaPredicted RBP18.9■□□□□ 0.62
RTN4-204ENST00000357732 RGPD4Q7Z3J3 1758 aa18.9■□□□□ 0.62
RTN4-204ENST00000357732 SMCHD1A6NHR9 2005 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 ABHD2P08910 425 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 MAPK4P31152 587 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 GCNT1Q02742 428 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 NUGGCQ68CJ6 796 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 PNMA8AQ86V59 439 aaPredicted RBP18.89■□□□□ 0.61
RTN4-204ENST00000357732 FBXL13Q8NEE6 735 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 PARD3BQ8TEW8 1205 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 DCLK3Q9C098 648 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 BATF3Q9NR55 127 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 ARHGEF3Q9NR81 526 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 THAP12O43422 761 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 CCND1P24385 295 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 E2F5Q15329 346 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 AOC3Q16853 763 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 CCDC38Q502W7 563 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 LARGE2Q8N3Y3 721 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 MAB21L3Q8N8X9 362 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 CCDC89Q8N998 374 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 DHX38Q92620 1227 aaKnown RBP18.89■□□□□ 0.61
RTN4-204ENST00000357732 TRIM7Q9C029 511 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 AGAP1Q9UPQ3 857 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 CD2APQ9Y5K6 639 aa18.89■□□□□ 0.61
RTN4-204ENST00000357732 GRIN3BO60391 1043 aa18.88■□□□□ 0.61
RTN4-204ENST00000357732 BRAFP15056 766 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms