RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ITIH3Q06033 890 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 XKR4Q5GH76 650 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 PALB2Q86YC2 1186 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 RIN2Q8WYP3 895 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 CLIC6Q96NY7 704 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 FIZ1Q96SL8 496 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 EMILIN2Q9BXX0 1053 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 MRPL4Q9BYD3 311 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 DZANK1Q9NVP4 752 aa18.37■□□□□ 0.53
PDLIM7-201ENST00000355572 I3L4J1 428 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 N4BP1O75113 896 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 BRCC3P46736 316 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 CLCNKBP51801 687 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 NCKAP1LP55160 1127 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 ZXDAP98168 799 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 BMS1Q14692 1282 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 LILRA6Q6PI73 481 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 GPR149Q86SP6 731 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 SPIRE2Q8WWL2 714 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 EDAQ92838 391 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 SNX27Q96L92 541 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 AK8Q96MA6 479 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 USP28Q96RU2 1077 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 IKZF4Q9H2S9 585 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 TSHZ2Q9NRE2 1034 aa18.36■□□□□ 0.53
PDLIM7-201ENST00000355572 SMIM28A0A1B0GU29 152 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 TGM5O43548 720 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 TADA2AO75478 443 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 BRD1O95696 1058 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 ASGR2P07307 311 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 USP41Q3LFD5 358 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 ZBTB41Q5SVQ8 909 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 FAM171A1Q5VUB5 890 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 RSPO2Q6UXX9 243 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 LNX1Q8TBB1 728 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 RAD54LQ92698 747 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 C18orf25Q96B23 403 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 ZNF707Q96C28 371 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 CDK5RAP3Q96JB5 506 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 CLSTN3Q9BQT9 956 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 SFXN1Q9H9B4 322 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 TSC2P49815 1807 aa18.35■□□□□ 0.53
PDLIM7-201ENST00000355572 A0A087X0B3 334 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 UBA7P41226 1012 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 TNFSF9P41273 254 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 SLC10A6Q3KNW5 377 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 CES5AQ6NT32 575 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 SLC39A4Q6P5W5 647 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 MPZL3Q6UWV2 235 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 CEP57Q86XR8 500 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 TIPINQ9BVW5 301 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 C17orf75Q9HAS0 396 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 RBM19Q9Y4C8 960 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-201ENST00000355572 SF3B1O75533 1304 aaKnown RBP eCLIP18.33■□□□□ 0.534e-7■■■■■ 44.1
PDLIM7-201ENST00000355572 TISP43B9A030 160 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 NR1I2O75469 434 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 PDGFBP01127 241 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 ADH1AP07327 375 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 MCF2P10911 925 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 TKTP29401 623 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 MTHFRP42898 656 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 ZNF131P52739 623 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 SPAG1Q07617 926 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 PTPN21Q16825 1174 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 UPP1Q16831 310 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 TRIM67Q6ZTA4 783 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 HAUS6Q7Z4H7 955 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 PIK3R5Q8WYR1 880 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 ASIC4Q96FT7 647 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 RIPOR3Q96MK2 946 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 CCSER1Q9C0I3 900 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 FNIP2Q9P278 1114 aa18.33■□□□□ 0.52
PDLIM7-201ENST00000355572 CCDC195A0A1B0GUA6 201 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 FAM189A1O60320 539 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 GLUD1P00367 558 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 NMT1P30419 496 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 ATAT1Q5SQI0 421 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 KCTD17Q8N5Z5 321 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 LARP4BQ92615 738 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 CALML4Q96GE6 196 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 NECTIN4Q96NY8 510 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 CCDC94Q9BW85 323 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 CNTN3Q9P232 1028 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 STK39Q9UEW8 545 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 SCN1AP35498 2009 aa18.32■□□□□ 0.52
PDLIM7-201ENST00000355572 TMEM221A6NGB7 291 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 TMEM189-UBE2V1I3L0A0 370 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 M0R296 226 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 TOM1L1O75674 476 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 PAPLNO95428 1278 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms